Suzanne Sindi
Suzanne Sindi
Associate Professor of Applied Mathematics
Verified email at ucmerced.edu - Homepage
Title
Cited by
Cited by
Year
A geometric approach for classification and comparison of structural variants
S Sindi, E Helman, A Bashir, BJ Raphael
Bioinformatics 25 (12), i222-i230, 2009
1962009
An integrative probabilistic model for identification of structural variation in sequencing data
SS Sindi, S Önal, LC Peng, HT Wu, BJ Raphael
Genome biology 13 (3), 1-25, 2012
1592012
A size threshold limits prion transmission and establishes phenotypic diversity
A Derdowski, SS Sindi, CL Klaips, S DiSalvo, TR Serio
Science 330 (6004), 680-683, 2010
1022010
Characterization of structural variants with single molecule and hybrid sequencing approaches
A Ritz, A Bashir, S Sindi, D Hsu, I Hajirasouliha, BJ Raphael
Bioinformatics 30 (24), 3458-3466, 2014
762014
Identification of polymorphic inversions from genotypes
A Cáceres, SS Sindi, BJ Raphael, M Cáceres, JR González
BMC bioinformatics 13 (1), 1-16, 2012
512012
Prion dynamics and the quest for the genetic determinant in protein-only inheritance
SS Sindi, TR Serio
Current opinion in microbiology 12 (6), 623-630, 2009
402009
Amyloid-associated activity contributes to the severity and toxicity of a prion phenotype
JA Pezza, J Villali, SS Sindi, TR Serio
Nature communications 5 (1), 1-11, 2014
352014
Integrated platform for manual and high‐throughput statistical validation of tandem mass spectra
K Yu, A Sabelli, L DeKeukelaere, R Park, S Sindi, CA Gatsonis, ...
Proteomics 9 (11), 3115-3125, 2009
322009
A local and global sensitivity analysis of a mathematical model of coagulation and platelet deposition under flow
KG Link, MT Stobb, J Di Paola, KB Neeves, AL Fogelson, SS Sindi, ...
PloS one 13 (7), e0200917, 2018
292018
Identification and frequency estimation of inversion polymorphisms from haplotype data
SS Sindi, BJ Raphael
Journal of computational biology 17 (3), 517-531, 2010
262010
CD8 follicular T cells promote B cell antibody class switch in autoimmune disease
KM Valentine, D Davini, TJ Lawrence, GN Mullins, M Manansala, ...
The Journal of Immunology 201 (1), 31-40, 2018
222018
Identification of structural variation
SS Sindi, BJ Raphael
Genome Analysis: Current Procedures and Applications 1, 2014
182014
Duplication count distributions in DNA sequences
SS Sindi, BR Hunt, JA Yorke
Physical Review E 78 (6), 061912, 2008
172008
Sparse signal recovery methods for variant detection in next-generation sequencing data.
M Banuelos, R Almanza, L Adhikari, S Sindi, RF Marcia
ICASSP, 864-868, 2016
162016
Link-capability driven network planning and operation
KM Cheung, CH Lee, WB Gearhart, T Vo, S Sindi
Proceedings, IEEE Aerospace Conference 7, 7-7, 2002
162002
The equilibrium distribution for a generalized Sankoff-Ferretti model accurately predicts chromosome size distributions in a wide variety of species
A De, M Ferguson, S Sindi, R Durrett
Journal of Applied Probability, 324-334, 2001
152001
Culturomics as a data playground for tests of selection: Mathematical approaches to detecting selection in word use
SS Sindi, R Dale
Journal of theoretical biology 405, 140-149, 2016
142016
Finding the boundary between evolutionary basins of attraction, and implications for Wright’s fitness landscape analogy
DM Weinreich, S Sindi, RA Watson
Journal of Statistical Mechanics: Theory and Experiment 2013 (01), P01001, 2013
142013
Sparse genomic structural variant detection: Exploiting parent-child relatedness for signal recovery
M Banuelos, R Almanza, L Adhikari, RF Mareia, S Sindi
2016 IEEE Statistical Signal Processing Workshop (SSP), 1-5, 2016
132016
A study in nucleated polymerization models of protein aggregation
JK Davis, SS Sindi
Applied mathematics letters 40, 97-101, 2015
132015
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Articles 1–20