Ruy M Ribeiro
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Increased turnover of T lymphocytes in HIV-1 infection and its reduction by antiretroviral therapy
H Mohri, AS Perelson, K Tung, RM Ribeiro, B Ramratnam, M Markowitz, ...
The Journal of experimental medicine 194 (9), 1277-1288, 2001
Rapid emergence of protease inhibitor resistance in hepatitis C virus
L Rong, H Dahari, RM Ribeiro, AS Perelson
Science translational medicine 2 (30), 30ra32-30ra32, 2010
Real time bayesian estimation of the epidemic potential of emerging infectious diseases
LMA Bettencourt, RM Ribeiro
PloS one 3 (5), e2185, 2008
Trypanosoma brucei parasites occupy and functionally adapt to the adipose tissue in mice
S Trindade, F Rijo-Ferreira, T Carvalho, D Pinto-Neves, F Guegan, ...
Cell host & microbe 19 (6), 837-848, 2016
Modeling the within-host dynamics of HIV infection
AS Perelson, RM Ribeiro
BMC biology 11, 1-10, 2013
HIV persistence in tissue macrophages of humanized myeloid-only mice during antiretroviral therapy
JB Honeycutt, WO Thayer, CE Baker, RM Ribeiro, SM Lada, Y Cao, ...
Nature medicine 23 (5), 638-643, 2017
Acute loss of intestinal CD4+ T cells is not predictive of simian immunodeficiency virus virulence
IV Pandrea, R Gautam, RM Ribeiro, JM Brenchley, IF Butler, M Pattison, ...
The Journal of Immunology 179 (5), 3035-3046, 2007
Analysis of hepatitis B viral load decline under potent therapy: complex decay profiles observed
SR Lewin, RM Ribeiro, T Walters, GK Lau, S Bowden, S Locarnini, ...
Hepatology 34 (5), 1012-1020, 2001
Estimation of the initial viral growth rate and basic reproductive number during acute HIV-1 infection
RM Ribeiro, L Qin, LL Chavez, D Li, SG Self, AS Perelson
Journal of virology 84 (12), 6096-6102, 2010
In vivo dynamics of T cell activation, proliferation, and death in HIV-1 infection: why are CD4+ but not CD8+ T cells depleted?
RM Ribeiro, H Mohri, DD Ho, AS Perelson
Proceedings of the National Academy of Sciences 99 (24), 15572-15577, 2002
Modeling the mechanisms of acute hepatitis B virus infection
SM Ciupe, RM Ribeiro, PW Nelson, AS Perelson
Journal of theoretical biology 247 (1), 23-35, 2007
Production of resistant HIV mutants during antiretroviral therapy
RM Ribeiro, S Bonhoeffer
Proceedings of the National Academy of Sciences 97 (14), 7681-7686, 2000
Kinetics of Coinfection with Influenza A Virus and Streptococcus pneumoniae
AM Smith, FR Adler, RM Ribeiro, RN Gutenkunst, JL McAuley, ...
PLoS pathogens 9 (3), e1003238, 2013
Viral dynamics and response differences in HCV-infected African American and white patients treated with IFN and ribavirin
JE Layden-Almer, RM Ribeiro, T Wiley, AS Perelson, TJ Layden
Hepatology 37 (6), 1343-1350, 2003
Dynamics of hepatitis B virus infection
RM Ribeiro, A Lo, AS Perelson
Microbes and Infection 4 (8), 829-835, 2002
Modeling hepatitis C virus dynamics: Liver regeneration and critical drug efficacy
H Dahari, A Lo, RM Ribeiro, AS Perelson
Journal of theoretical biology 247 (2), 371-381, 2007
CD8+ lymphocytes control viral replication in SIVmac239-infected rhesus macaques without decreasing the lifespan of productively infected cells
NR Klatt, E Shudo, AM Ortiz, JC Engram, M Paiardini, B Lawson, ...
PLoS pathogens 6 (1), e1000747, 2010
Quantifying the diversification of hepatitis C virus (HCV) during primary infection: estimates of the in vivo mutation rate
RM Ribeiro, H Li, S Wang, MB Stoddard, GH Learn, BT Korber, ...
Public Library of Science 8 (8), e1002881, 2012
The level of monocyte turnover predicts disease progression in the macaque model of AIDS
A Hasegawa, H Liu, B Ling, JT Borda, X Alvarez, C Sugimoto, ...
Blood, The Journal of the American Society of Hematology 114 (14), 2917-2925, 2009
The frequency of resistant mutant virus before antiviral therapy
RM Ribeiro, S Bonhoeffer, MA Nowak
Aids 12 (5), 461-465, 1998
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