| Super-enhancers at the Nanog locus differentially regulate neighboring pluripotency-associated genes S Blinka, MH Reimer, K Pulakanti, S Rao Cell reports 17 (1), 19-28, 2016 | 97 | 2016 |
| A CHAF1B-dependent molecular switch in hematopoiesis and leukemia pathogenesis A Volk, K Liang, P Suraneni, X Li, J Zhao, M Bulic, S Marshall, K Pulakanti, ... Cancer cell 34 (5), 707-723. e7, 2018 | 69 | 2018 |
| Enhancer transcribed RNAs arise from hypomethylated, Tet-occupied genomic regions K Pulakanti, L Pinello, C Stelloh, S Blinka, J Allred, S Milanovich, ... Epigenetics 8 (12), 1303-1320, 2013 | 68 | 2013 |
| GATA6 is essential for endoderm formation from human pluripotent stem cells JB Fisher, K Pulakanti, S Rao, SA Duncan Biology Open 6 (7), 1084-1095, 2017 | 62 | 2017 |
| The cohesin subunit Rad21 is a negative regulator of hematopoietic self-renewal through epigenetic repression of Hoxa7 and Hoxa9 JB Fisher, J Peterson, M Reimer, C Stelloh, K Pulakanti, ZJ Gerbec, ... Leukemia 31 (3), 712-719, 2017 | 61 | 2017 |
| GATA4 is sufficient to establish jejunal versus ileal identity in the small intestine CA Thompson, K Wojta, K Pulakanti, S Rao, P Dawson, MA Battle Cellular and molecular gastroenterology and hepatology 3 (3), 422-446, 2017 | 55 | 2017 |
| Dynamic Switching of Active Promoter and Enhancer Domains Regulates Tet1 and Tet2 Expression during Cell State Transitions between Pluripotency and … A Sohni, M Bartoccetti, R Khoueiry, L Spans, J Vande Velde, L De Troyer, ... Molecular and cellular biology 35 (6), 1026-1042, 2015 | 53 | 2015 |
| HNF4A regulates the formation of hepatic progenitor cells from human iPSC-derived endoderm by facilitating efficient recruitment of RNA Pol II A DeLaForest, F Di Furio, R Jing, A Ludwig-Kubinski, K Twaroski, A Urick, ... Genes 10 (1), 21, 2018 | 36 | 2018 |
| Mature IgDlow/- B cells maintain tolerance by promoting regulatory T cell homeostasis A Ray, MI Khalil, KL Pulakanti, RT Burns, CJ Gurski, S Basu, D Wang, ... Nature communications 10 (1), 190, 2019 | 31 | 2019 |
| Decitabine and vorinostat with FLAG chemotherapy in pediatric relapsed/refractory AML: Report from the therapeutic advances in childhood leukemia and lymphoma (TACL) consortium L Pommert, ES Schafer, J Malvar, N Gossai, E Florendo, K Pulakanti, ... American journal of hematology 97 (5), 613-622, 2022 | 25 | 2022 |
| ARID3A and ARID3B induce stem promoting pathways in ovarian cancer cells P Dausinas, K Pulakanti, S Rao, JM Cole, R Dahl, KDC Dahl Gene 738, 144458, 2020 | 20 | 2020 |
| T cells deficient in diacylglycerol kinase ζ are resistant to PD-1 inhibition and help create persistent host immunity to leukemia W Jing, JA Gershan, S Holzhauer, J Weber, K Palen, L McOlash, ... Cancer Research 77 (20), 5676-5686, 2017 | 19 | 2017 |
| Identification of transcribed enhancers by genome-wide chromatin immunoprecipitation sequencing S Blinka, MH Reimer, K Pulakanti, L Pinello, GC Yuan, S Rao Enhancer RNAs: Methods and Protocols, 91-109, 2017 | 19 | 2017 |
| The miR-23a∼ 27a∼ 24-2 microRNA cluster promotes inflammatory polarization of macrophages A Boucher, N Klopfenstein, WM Hallas, J Skibbe, A Appert, SH Jang, ... The Journal of Immunology 206 (3), 540-553, 2021 | 16 | 2021 |
| Downregulation of neurodevelopmental gene expression in iPSC-derived cerebral organoids upon infection by human cytomegalovirus BS O’Brien, RL Mokry, ML Schumacher, K Pulakanti, S Rao, SS Terhune, ... Iscience 25 (4), 2022 | 13 | 2022 |
| Genome editing demonstrates that the− 5 kb Nanog enhancer regulates Nanog expression by modulating RNAPII initiation and/or recruitment P Agrawal, S Blinka, K Pulakanti, MH Reimer, C Stelloh, AE Meyer, S Rao Journal of Biological Chemistry 296, 2021 | 13 | 2021 |
| The cohesin-associated protein Wapal is required for proper Polycomb-mediated gene silencing C Stelloh, MH Reimer, K Pulakanti, S Blinka, J Peterson, L Pinello, S Jia, ... Epigenetics & chromatin 9, 1-18, 2016 | 12 | 2016 |
| GATA4 controls epithelial morphogenesis in the developing stomach to promote establishment of glandular columnar epithelium A DeLaForest, BM Kohlnhofer, OD Franklin, R Stavniichuk, CA Thompson, ... Cellular and Molecular Gastroenterology and Hepatology 12 (4), 1391-1413, 2021 | 11 | 2021 |
| DOT1L inhibitors block abnormal self-renewal induced by cohesin loss KE Heimbruch, JB Fisher, CT Stelloh, E Phillips, MH Reimer Jr, ... Scientific Reports 11 (1), 7288, 2021 | 10 | 2021 |
| Tumor suppressor interferon regulatory factor 1 selectively blocks expression of endogenous retrovirus KP Stoltz, CN Jondle, K Pulakanti, PA Sylvester, R Urrutia, S Rao, ... Virology 526, 52-60, 2019 | 10 | 2019 |
