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Ravi Sheth
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Manipulating bacterial communities by in situ microbiome engineering
RU Sheth, V Cabral, SP Chen, HH Wang
Trends in Genetics 32 (4), 189-200, 2016
2642016
Engineering bacterial thiosulfate and tetrathionate sensors for detecting gut inflammation
KNM Daeffler, JD Galley, RU Sheth, LC Ortiz‐Velez, CO Bibb, NF Shroyer, ...
Molecular systems biology 13 (4), 923, 2017
2482017
Refactoring and Optimization of Light-Switchable Escherichia coli Two-Component Systems
SR Schmidl, RU Sheth, A Wu, JJ Tabor
ACS synthetic biology 3 (11), 820-831, 2014
1842014
Multiplex recording of cellular events over time on CRISPR biological tape
RU Sheth, SS Yim, FL Wu, HH Wang
Science 358 (6369), 1457-1461, 2017
1662017
DNA-based memory devices for recording cellular events
RU Sheth, HH Wang
Nature Reviews Genetics 19 (11), 718-732, 2018
1362018
Spatial metagenomic characterization of microbial biogeography in the gut
RU Sheth, M Li, W Jiang, PA Sims, KW Leong, HH Wang
Nature biotechnology 37 (8), 877-883, 2019
1122019
Rewiring bacterial two-component systems by modular DNA-binding domain swapping
SR Schmidl, F Ekness, K Sofjan, KNM Daeffler, KR Brink, BP Landry, ...
Nature Chemical Biology 15 (7), 690-698, 2019
902019
Robust direct digital-to-biological data storage in living cells
SS Yim, RM McBee, AM Song, Y Huang, RU Sheth, HH Wang
Nature Chemical Biology 17 (3), 246-253, 2021
652021
Recording mobile DNA in the gut microbiota using an Escherichia coli CRISPR-Cas spacer acquisition platform
C Munck, RU Sheth, DE Freedberg, HH Wang
Nature communications 11 (1), 95, 2020
642020
Macroecological dynamics of gut microbiota
BW Ji, RU Sheth, PD Dixit, K Tchourine, D Vitkup
Nature microbiology 5 (5), 768-775, 2020
622020
Quantifying spatiotemporal variability and noise in absolute microbiota abundances using replicate sampling
BW Ji, RU Sheth, PD Dixit, Y Huang, A Kaufman, HH Wang, D Vitkup
Nature Methods 16 (8), 731-736, 2019
602019
Quantifying spatiotemporal variability and noise in absolute microbiota abundances using replicate sampling
BW Ji, RU Sheth, PD Dixit, Y Huang, A Kaufman, HH Wang, D Vitkup
Nature Methods 16 (8), 731-736, 2019
602019
Scalable and cost-effective ribonuclease-based rRNA depletion for transcriptomics
Y Huang, RU Sheth, A Kaufman, HH Wang
Nucleic acids research 48 (4), e20-e20, 2020
442020
High-throughput microbial culturomics using automation and machine learning
Y Huang, RU Sheth, S Zhao, LA Cohen, K Dabaghi, T Moody, Y Sun, ...
Nature Biotechnology 41 (10), 1424-1433, 2023
432023
The effect of short-course antibiotics on the resistance profile of colonizing gut bacteria in the ICU: a prospective cohort study
C Munck, RU Sheth, E Cuaresma, J Weidler, SL Stump, P Zachariah, ...
Critical Care 24, 1-10, 2020
72020
The effect of short-course antibiotics on the resistance profile of colonizing gut bacteria in the ICU: a prospective cohort study
C Munck, RU Sheth, E Cuaresma, J Weidler, SL Stump, P Zachariah, ...
Critical Care 24, 1-10, 2020
72020
The effect of short-course antibiotics on the resistance profile of colonizing gut bacteria in the ICU: a prospective cohort study
C Munck, RU Sheth, E Cuaresma, J Weidler, SL Stump, P Zachariah, ...
Critical Care 24, 1-10, 2020
72020
Real-time capture of horizontal gene transfers from gut microbiota by engineered CRISPR-Cas acquisition
C Munck, RU Sheth, DE Freedberg, HH Wang
bioRxiv, 492751, 2018
62018
Quantification of human gut microbiota variability using replicate sampling and spike-in sequencing
BW Ji, RU Sheth, PD Dixit, HH Wang, D Vitkup
bioRxiv, 310649, 2018
22018
Spatial metagenomic characterization of microbial biogeography
HH Wang, R Sheth
US Patent 11,525,164, 2022
12022
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Articles 1–20