| Synthetic rewiring of plant CO2 sequestration galvanizes plant biomass production M Naseem, Ö Osmanoglu, T Dandekar Trends in biotechnology 38 (4), 354-359, 2020 | 18 | 2020 |
| Genome-wide inference of the Camponotus floridanus protein-protein interaction network using homologous mapping and interacting domain profile pairs SK Gupta, M Srivastava, Ö Osmanoglu, T Dandekar Scientific Reports 10 (1), 2334, 2020 | 10 | 2020 |
| Aspergillus fumigatus versus Genus Aspergillus: Conservation, Adaptive Evolution and Specific Virulence Genes SK Gupta, M Srivastava, Ö Osmanoglu, Z Xu, AA Brakhage, T Dandekar Microorganisms 9 (10), 2014, 2021 | 9 | 2021 |
| Pathogen and host-pathogen protein interactions provide a key to identify novel drug targets SK Gupta, Ö Osmanoglu, M Srivastava, E Bencúrová, T Dandekar Reference Module in Biomedical Sciences; Elsevier: Amsterdam, The Netherlands, 2020 | 8 | 2020 |
| Topological Analysis of the Carbon-Concentrating CETCH Cycle and a Photorespiratory Bypass Reveals Boosted CO2-Sequestration by Plants Ö Osmanoglu, M Khaled AlSeiari, HA AlKhoori, S Shams, E Bencurova, ... Frontiers in Bioengineering and Biotechnology 9, 708417, 2021 | 4 | 2021 |
| Genome-wide scan for potential CD4+ T-cell vaccine candidates in Candida auris by exploiting reverse vaccinology and evolutionary information SK Gupta, Ö Osmanoglu, R Minocha, SR Bandi, E Bencurova, ... Frontiers in Medicine 9, 1008527, 2022 | 3 | 2022 |
| A modular systems biological modelling framework studies cyclic nucleotide signaling in platelets T Breitenbach, N Englert, Ö Osmanoglu, N Rukoyatkina, G Wangorsch, ... Journal of Theoretical Biology 550, 111222, 2022 | 2 | 2022 |
| Modeling immune dynamics in plants using JIMENA-package Ö Osmanoglu, S Shams, T Dandekar, M Naseem Modeling Transcriptional Regulation: Methods and Protocols, 183-189, 2021 | 2 | 2021 |
| Signaling network analysis reveals fostamatinib as a potential drug to control platelet hyperactivation during SARS-CoV-2 infection Ö Osmanoglu, SK Gupta, A Almasi, S Yagci, M Srivastava, GHM Araujo, ... Frontiers in Immunology 14, 1285345, 2023 | 1 | 2023 |
| Molecular Modeling of the Interaction Between Stem Cell Peptide and Immune Receptor in Plants M Naseem, M Srivastava, O Osmanoglu, J Iqbal, FM Howari, ... Plant Stem Cells: Methods and Protocols, 67-77, 2020 | 1 | 2020 |
| From Proteins to Networks: Assembly, Interpretation, and Advances SK Gupta, R Minocha, A Akash, S Parkar, L Sirkinti, PJ Thapa, A Almasi, ... Bioinformatics and Computational Biology, 199-224, 2024 | | 2024 |
| Signaling network analysis reveals fostamatinib as a potential drug to control platelet hyperactivation during SARS-CoV-2 infection Ö Osmanoglu, SK Gupta, A Almasi, S Yagci, M Srivastava, GHM Araujo, ... Frontiers in Immunology 14, 1285345, 2023 | | 2023 |
| Klimapflanzen und biologische Wege zu negativen Kohlendioxidemissionen T Dandekar, E Bencurova, Ö Osmanoglu, M Naseem BIOspektrum 27, 769-772, 2021 | | 2021 |
| How biological cells including platelets and megakaryocytes decide complex problems fast but risky J Prada, J Balkenhol, M Kaltdorf, Ö Osmanoglu, M Stoerkle, K Heinze, ... bioRxiv, 2021.09. 10.459594, 2021 | | 2021 |
| Integrated framework of the immune-defense transcriptional signatures in the Arabidopsis shoot apical meristem M Naseem, Ö Osmanoğlu, M Kaltdorf, AAMA Alblooshi, J Iqbal, ... International Journal of Molecular Sciences 21 (16), 5745, 2020 | | 2020 |
| Bacterial Shoot Apical Meristem Inoculation Assay M Naseem, G Gun, O Osmanoglu, FA AlRemeithi, J Iqbal, T Dandekar Plant Stem Cells: Methods and Protocols, 17-22, 2020 | | 2020 |
| Mapping a Transcriptome-Guided Arabidopsis SAM Interactome M Naseem, O Osmanoglu, J Iqbal, FM Howari, FA AlRemeithi, M Kaltdorf, ... Plant Stem Cells: Methods and Protocols, 113-118, 2020 | | 2020 |
