| Comprehensive characterization of lncRNA-mRNA related ceRNA network across 12 major cancers Y Zhang, Y Xu, LI Feng, F Li, Z Sun, T Wu, X Shi, J Li, X Li Oncotarget 7 (39), 64148, 2016 | 168 | 2016 |
| Single-cell RNA profiling of glomerular cells shows dynamic changes in experimental diabetic kidney disease J Fu, KM Akat, Z Sun, W Zhang, D Schlondorff, Z Liu, T Tuschl, K Lee, ... Journal of the American Society of Nephrology 30 (4), 533-545, 2019 | 156 | 2019 |
| Subpathway-GM: identification of metabolic subpathways via joint power of interesting genes and metabolites and their topologies within pathways C Li, J Han, Q Yao, C Zou, Y Xu, C Zhang, D Shang, L Zhou, C Zou, Z Sun, ... Nucleic acids research 41 (9), e101-e101, 2013 | 118 | 2013 |
| Comparison of kidney transcriptomic profiles of early and advanced diabetic nephropathy reveals potential new mechanisms for disease progression Y Fan, Z Yi, VD D’Agati, Z Sun, F Zhong, W Zhang, J Wen, T Zhou, Z Li, ... Diabetes 68 (12), 2301-2314, 2019 | 86 | 2019 |
| A peripheral blood gene expression signature to diagnose subclinical acute rejection W Zhang, Z Yi, KL Keung, H Shang, C Wei, P Cravedi, Z Sun, C Xi, ... Journal of the American Society of Nephrology 30 (8), 1481-1494, 2019 | 77 | 2019 |
| Global prioritization of disease candidate metabolites based on a multi-omics composite network Q Yao, Y Xu, H Yang, D Shang, C Zhang, Y Zhang, Z Sun, X Shi, L Feng, ... Scientific reports 5 (1), 17201, 2015 | 49 | 2015 |
| Deep learning identified pathological abnormalities predictive of graft loss in kidney transplant biopsies Z Yi, F Salem, MC Menon, K Keung, C Xi, S Hultin, MRH Al Rasheed, L Li, ... Kidney international 101 (2), 288-298, 2022 | 39 | 2022 |
| Recipient APOL1 risk alleles associate with death-censored renal allograft survival and rejection episodes Z Zhang, Z Sun, J Fu, Q Lin, K Banu, K Chauhan, M Planoutene, C Wei, ... The Journal of Clinical Investigation 131 (22), 2021 | 39 | 2021 |
| ESEA: discovering the dysregulated pathways based on edge set enrichment analysis J Han, X Shi, Y Zhang, Y Xu, Y Jiang, C Zhang, L Feng, H Yang, D Shang, ... Scientific reports 5 (1), 13044, 2015 | 37 | 2015 |
| LncRNAs2Pathways: identifying the pathways influenced by a set of lncRNAs of interest based on a global network propagation method J Han, S Liu, Z Sun, Y Zhang, F Zhang, C Zhang, D Shang, H Yang, F Su, ... Scientific reports 7 (1), 46566, 2017 | 35 | 2017 |
| LINE-1 retrotransposition promotes the development and progression of lung squamous cell carcinoma by disrupting the tumor-suppressor gene FGGY R Zhang, F Zhang, Z Sun, P Liu, X Zhang, Y Ye, B Cai, MJ Walsh, X Ren, ... Cancer Research 79 (17), 4453-4465, 2019 | 32 | 2019 |
| The first chromosome‐level genome for a marine mammal as a resource to study ecology and evolution G Fan, Y Zhang, X Liu, J Wang, Z Sun, S Sun, H Zhang, J Chen, M Lv, ... Molecular ecology resources 19 (4), 944-956, 2019 | 30 | 2019 |
| Pretransplant transcriptomic signature in peripheral blood predicts early acute rejection W Zhang, Z Yi, C Wei, KL Keung, Z Sun, C Xi, C Woytovich, S Farouk, ... JCI insight 4 (11), 2019 | 30 | 2019 |
| The single-cell landscape of kidney immune cells reveals transcriptional heterogeneity in early diabetic kidney disease J Fu, Z Sun, X Wang, T Zhang, W Yuan, F Salem, SMW Yu, W Zhang, ... Kidney international 102 (6), 1291-1304, 2022 | 29 | 2022 |
| Genome-wide non-HLA donor-recipient genetic differences influence renal allograft survival via early allograft fibrosis Z Zhang, MC Menon, W Zhang, E Stahl, BL Loza, IA Rosales, Z Yi, K Banu, ... Kidney international 98 (3), 758-768, 2020 | 26 | 2020 |
| Subpathway-GMir: identifying miRNA-mediated metabolic subpathways by integrating condition-specific genes, microRNAs, and pathway topologies L Feng, Y Xu, Y Zhang, Z Sun, J Han, C Zhang, H Yang, D Shang, F Su, ... Oncotarget 6 (36), 39151, 2015 | 24 | 2015 |
| Kidney single-cell transcriptome profile reveals distinct response of proximal tubule cells to SGLT2i and ARB treatment in diabetic mice J Wu, Z Sun, S Yang, J Fu, Y Fan, N Wang, J Hu, L Ma, C Peng, Z Wang, ... Molecular Therapy 30 (4), 1741-1753, 2022 | 23 | 2022 |
| The LncRNA connectivity map: using LncRNA signatures to connect small molecules, LncRNAs, and diseases H Yang, D Shang, Y Xu, C Zhang, L Feng, Z Sun, X Shi, Y Zhang, J Han, ... Scientific Reports 7 (1), 6655, 2017 | 23 | 2017 |
| Subpathway-LNCE: Identify dysfunctional subpathways competitively regulated by lncRNAs through integrating lncRNA-mRNA expression profile and pathway topologies X Shi, Y Xu, C Zhang, L Feng, Z Sun, J Han, F Su, Y Zhang, C Li, X Li Oncotarget 7 (43), 69857, 2016 | 21 | 2016 |
| Molecular analysis of the kidney from a patient with COVID-19–associated collapsing glomerulopathy K Meliambro, X Li, F Salem, Z Yi, Z Sun, L Chan, M Chung, J Chancay, ... Kidney Medicine 3 (4), 653-658, 2021 | 20 | 2021 |
