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Aditi Borkar
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Structure of a low-population binding intermediate in protein-RNA recognition
AN Borkar, MF Bardaro Jr, C Camilloni, FA Aprile, G Varani, ...
Proceedings of the National Academy of Sciences 113 (26), 7171-7176, 2016
592016
Root angle in maize influences nitrogen capture and is regulated by calcineurin B‐like protein (CBL)‐interacting serine/threonine‐protein kinase 15 (ZmCIPK15)
HM Schneider, VSN Lor, MT Hanlon, A Perkins, SM Kaeppler, AN Borkar, ...
Plant, Cell & Environment 45 (3), 837-853, 2022
532022
KAP1 is a chromatin reader that couples steps of RNA polymerase II transcription to sustain oncogenic programs
CW Bacon, A Challa, U Hyder, A Shukla, AN Borkar, J Bayo, J Liu, SY Wu, ...
Molecular cell 78 (6), 1133-1151. e14, 2020
282020
Simultaneous NMR characterisation of multiple minima in the free energy landscape of an RNA UUCG tetraloop
AN Borkar, P Vallurupalli, C Camilloni, LE Kay, M Vendruscolo
Physical chemistry chemical physics 19 (4), 2797-2804, 2017
272017
Root angle is controlled by EGT1 in cereal crops employing an antigravitropic mechanism
R Fusi, S Rosignoli, H Lou, G Sangiorgi, R Bovina, JK Pattem, AN Borkar, ...
Proceedings of the National Academy of Sciences 119 (31), e2201350119, 2022
262022
Transcription factor bHLH121 regulates root cortical aerenchyma formation in maize
HM Schneider, VS Lor, X Zhang, P Saengwilai, MT Hanlon, SP Klein, ...
Proceedings of the National Academy of Sciences 120 (12), e2219668120, 2023
162023
A method of determining RNA conformational ensembles using structure-based calculations of residual dipolar couplings
AN Borkar, A De Simone, RW Montalvao, M Vendruscolo
The Journal of Chemical Physics 138 (21), 2013
162013
Visualization of early events in acetic acid denaturation of HIV-1 protease: a molecular dynamics study
AN Borkar, MK Rout, RV Hosur
PLoS One 6 (6), e19830, 2011
142011
Structure and dynamics of double helical DNA in torsion angle hyperspace: A molecular mechanics approach
A Borkar, I Ghosh, D Bhattacharyya
Journal of Biomolecular Structure and Dynamics 27 (5), 695-712, 2010
142010
AUTOBA: automation of backbone assignment from HN (C) N suite of experiments
A Borkar, D Kumar, RV Hosur
Journal of biomolecular NMR 50, 285-297, 2011
132011
Facile backbone (1H, 15N, 13Ca, and 13C′) assignment of 13C/15N‐labeled proteins using orthogonal projection planes of HNN and HN(C)N experiments …
D Kumar, A Borkar, RV Hosur
Magnetic Resonance in Chemistry 50 (5), 357-363, 2012
82012
Denaturation of HIV-1 Protease (PR) monomer by acetic acid: mechanistic and trajectory insights from molecular dynamics simulations and NMR
A Borkar, MK Rout, RV Hosur
Journal of Biomolecular Structure and Dynamics 29 (5), 893-903, 2012
82012
Identification and characterisation of a rare MTTP variant underlying hereditary non-alcoholic fatty liver disease
JI Grove, PCK Lo, N Shrine, J Barwell, LV Wain, MD Tobin, AM Salter, ...
JHEP Reports 5 (8), 100764, 2023
42023
Crystal structure of the C-terminal domain of DENR
IB Lomakin, S De, J Wang, AN Borkar, TA Steitz
Computational and Structural Biotechnology Journal 18, 696-704, 2020
32020
Structural basis for assembly and function of the 7SK snRNP complex
AN Borkar, I D’Orso
Non-coding RNA Investigation 2, 2018
12018
The auxin efflux carrier PIN1a regulates vascular patterning in cereal roots
R Fusi, SG Milner, S Rosignoli, R Bovina, C De Jesus Vieira Teixeira, ...
New Phytologist, 2024
2024
Integrating Cryo-OrbiSIMS with Computational Modelling and Metadynamics Simulations Enhances RNA Structure Prediction at Atomic Resolution: Source cryo-OrbiSIMS Data
A Borkar, A Kotowska, J Watts
University of Nottingham, 2023
2023
Identification and characterisation of a rare MTTP variant underlying hereditary non-alcoholic fatty liver disease.
JI Grove, PCK Lo, N Shrine, J Barwell, LV Wain, MD Tobin, AM Salter, ...
JHEP Reports: Innovation in Hepatology 5 (8), 100764-100764, 2023
2023
Root angle is controlled by EGT1in cereal crops employing anantigravitropic mechanism
R Fusi, S Rosignoli, H Lou, G Sangiorgi, R Bovina, JK Pattem, AN Borkar, ...
Proceedings of the National Academy of Sciences, 2022
2022
89 Constructing free energy landscapes of RNAs at atomic resolution and characterisation of their excited states
AN Borkar, P Vallurupalli, C Camilloni, LE Kay, M Vendruscolo
Journal of Biomolecular Structure and Dynamics 33 (sup1), 58-58, 2015
2015
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Articles 1–20