Francesca Chiaromonte

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Kateryna MakovaProfessor of Biology, Penn State UniversityVerified email at psu.edu
Webb MillerPenn State University, UC Santa Barbara, ArizonaVerified email at bx.psu.edu
Ross C. HardisonProfessor Emeritus of Biochemistry and Molecular Biology, The Pennsylvania State UniversityVerified email at psu.edu
Marzia Angela CremonaDepartment of Operations and Decision Systems, Université LavalVerified email at fsa.ulaval.ca
James TaylorProfessor of Biology and Computer Science, Johns Hopkins UniversityVerified email at jhu.edu
Bing LiProfessor of Statistics, Pennsylvania State UniversityVerified email at stat.psu.edu
Laura ElnitskiNHGRI, NIHVerified email at mail.nih.gov
Svitlana TyekuchevaResearch Scientist, Dana-Farber Cancer InstituteVerified email at dfci.harvard.edu
Ian M PaulPenn State College of MedicineVerified email at psu.edu
R. Dennis CookProfessor of Statistics, University of MinnesotaVerified email at umn.edu
Francesco LampertiScuola Superiore Sant'Anna & RFF-CMCC European Institute on Economics and the EnvironmentVerified email at sssup.it
Matthew ReimherrAmazon, Pennsylvania State UniversityVerified email at psu.edu
Anton NekrutenkoPenn State UniversityVerified email at nekrut.org
David HausslerScientific Director, UC Santa Cruz Genomics Institute, University of California, Santa CruzVerified email at soe.ucsc.edu
Wilfried GuibletPenn State UniversityVerified email at psu.edu
Giovanni DosiScuola Superiore S.Anna, Pisa, ItalyVerified email at sssup.it
Matteo CoroneseInstitute of Economics, Sant'Anna School of Advanced StudiesVerified email at santannapisa.it
Andrea RoventiniScuola Superiore Sant'AnnaVerified email at sssup.it
Monika CechovaAssistant Professor, Faculty of Informatics, Masaryk UniversityVerified email at fi.muni.cz
Tobia BoschiIBM Research EuropeVerified email at ibm.com

Francesca Chiaromonte

Professor of Statistics, Pennsylvania State University, Sant'Anna School of Advanced Studies

Verified email at psu.edu

Statistics Genomics Bioinformatics Meteorology Economics


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Initial sequencing and comparative analysis of the mouse genome European Bioinformatics Institute: Birney Ewan 3 Goldman Nick 3 Kasprzyk ... Nature 420 (6915), 520-562, 2002	8780	2002
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution Project management: Fulton Lucinda A. 1 Mardis Elaine R. 1 Wilson Richard K. 1 Nature 432 (7018), 695-716, 2004	2965	2004
Genome sequence of the Brown Norway rat yields insights into mammalian evolution University of Utah Weiss Robert B. 14 Dunn Diane M. 14, ... Nature 428 (6982), 493-521, 2004	2594	2004
Scoring pairwise genomic sequence alignments F Chiaromonte, VB Yap, W Miller Biocomputing 2002, 115-126, 2001	771	2001
Complete Khoisan and Bantu genomes from southern Africa SC Schuster, W Miller, A Ratan, LP Tomsho, B Giardine, LR Kasson, ... Nature 463 (7283), 943-947, 2010	547	2010
Evidence for sharp increase in the economic damages of extreme natural disasters M Coronese, F Lamperti, K Keller, F Chiaromonte, A Roventini Proceedings of the National Academy of Sciences 116 (43), 21450-21455, 2019	402	2019
Computational pan-genomics: status, promises and challenges Briefings in bioinformatics 19 (1), 118-135, 2018	369	2018
Contour regression: a general approach to dimension reduction B Li, H Zha, F Chiaromonte The Annals of Statistics 33 (4), 1580-1616, 2005	369	2005
Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution RC Hardison, KM Roskin, S Yang, M Diekhans, WJ Kent, R Weber, ... Genome research 13 (1), 13-26, 2003	362	2003
Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis RA Gutiérrez, LV Lejay, A Dean, F Chiaromonte, DE Shasha, GM Coruzzi Genome biology 8, 1-13, 2007	343	2007
The genome-wide determinants of human and chimpanzee microsatellite evolution YD Kelkar, S Tyekucheva, F Chiaromonte, KD Makova Genome research 18 (1), 30-38, 2008	295	2008
Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression Y Cheng, W Wu, SA Kumar, D Yu, W Deng, T Tripic, DC King, KB Chen, ... Genome research 19 (12), 2172-2184, 2009	274	2009
Maternal age effect and severe germ-line bottleneck in the inheritance of human mitochondrial DNA B Rebolledo-Jaramillo, MSW Su, N Stoler, JA McElhoe, B Dickins, ... Proceedings of the National Academy of Sciences 111 (43), 15474-15479, 2014	270	2014
Evaluation of regulatory potential and conservation scores for detecting cis-regulatory modules in aligned mammalian genome sequences DC King, J Taylor, L Elnitski, F Chiaromonte, W Miller, RC Hardison Genome research 15 (8), 1051-1060, 2005	258	2005
Envelope models for parsimonious and efficient multivariate linear regression RD Cook, B Li, F Chiaromonte Statistica Sinica, 927-960, 2010	251	2010
Sufficient dimension reduction in regressions with categorical predictors F Chiaromonte, RD Cook, B Li The Annals of Statistics, 475-497, 2002	202	2002
A genome-wide analysis of common fragile sites: what features determine chromosomal instability in the human genome? A Fungtammasan, E Walsh, F Chiaromonte, KA Eckert, KD Makova Genome research 22 (6), 993-1005, 2012	185	2012
What is a microsatellite: a computational and experimental definition based upon repeat mutational behavior at A/T and GT/AC repeats YD Kelkar, N Strubczewski, SE Hile, F Chiaromonte, KA Eckert, ... Genome biology and evolution 2, 620-635, 2010	178	2010
Heterogeneity, competition, and macroeconomic dynamics F Chiaromonte, G Dosi Structural Change and Economic Dynamics 4 (1), 39-63, 1993	178	1993
Distinguishing regulatory DNA from neutral sites L Elnitski, RC Hardison, J Li, S Yang, D Kolbe, P Eswara, MJ O'Connor, ... Genome Research 13 (1), 64-72, 2003	174	2003

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