Saikat Chakrabarti
Saikat Chakrabarti
National Center for Biological Science, National Centre for Biotechnology Information, Indian
Verified email at iicb.res.in - Homepage
Title
Cited by
Cited by
Year
Coevolution in defining the functional specificity
S Chakrabarti, AR Panchenko
Proteins: Structure, Function, and Bioinformatics 75 (1), 231-240, 2009
632009
Identification and molecular characterization of an Alba-family protein from human malaria parasite Plasmodium falciparum
M Goyal, A Alam, MS Iqbal, S Dey, S Bindu, C Pal, A Banerjee, ...
Nucleic acids research 40 (3), 1174-1190, 2011
622011
Functional specificity lies within the properties and evolutionary changes of amino acids
S Chakrabarti, SH Bryant, AR Panchenko
Journal of molecular biology 373 (3), 801-810, 2007
622007
Antiviral activity of baicalin against influenza virus H1N1-pdm09 is due to modulation of NS1-mediated cellular innate immune responses
MK Nayak, AS Agrawal, S Bose, S Naskar, R Bhowmick, S Chakrabarti, ...
Journal of Antimicrobial Chemotherapy 69 (5), 1298-1310, 2014
542014
Analysis and prediction of functionally important sites in proteins
S Chakrabarti, CJ Lanczycki
Protein science 16 (1), 4-13, 2007
522007
DNA damage-induced ephrin-B2 reverse signaling promotes chemoresistance and drives EMT in colorectal carcinoma harboring mutant p53
SK Alam, VK Yadav, S Bajaj, A Datta, SK Dutta, M Bhattacharyya, ...
Cell Death & Differentiation, 2015
502015
A transient reversal of miRNA‐mediated repression controls macrophage activation
A Mazumder, M Bose, A Chakraborty, S Chakrabarti, SN Bhattacharyya
EMBO reports 14 (11), 1008-1016, 2013
492013
DBETH: A Database of Bacterial Exotoxins for Human
A Chakraborty, S Ghosh, G Chowdhary, U Maulik, S Chakrabarti
Nucleic Acids Research 40 (D1), D615-D620, 2012
482012
Refining multiple sequence alignments with conserved core regions
S Chakrabarti, CJ Lanczycki, AR Panchenko, TM Przytycka, PA Thiessen, ...
Nucleic acids research 34 (9), 2598-2606, 2006
462006
Structural and functional roles of coevolved sites in proteins
S Chakrabarti, AR Panchenko
PloS one 5 (1), e8591, 2010
412010
A survey on prediction of specificity-determining sites in proteins
A Chakraborty, S Chakrabarti
Briefings in bioinformatics 16 (1), 71-88, 2014
402014
MicroRNA profiling of cisplatin-resistant oral squamous cell carcinoma cell lines enriched with cancer-stem-cell-like and epithelial-mesenchymal transition-type features
RD Ghosh, S Ghuwalewala, P Das, S Mandloi, SK Alam, J Chakraborty, ...
Scientific reports 6, 23932, 2016
352016
mTORC2 controls cancer cell survival by modulating gluconeogenesis
MW Khan, D Biswas, M Ghosh, S Mandloi, S Chakrabarti, P Chakrabarti
Cell death discovery 1, 15016, 2015
302015
Ensemble approach to predict specificity determinants: benchmarking and validation
S Chakrabarti, A Panchenko
BMC bioinformatics 10 (1), 207, 2009
282009
MegaMotifBase: a database of structural motifs in protein families and superfamilies
G Pugalenthi, PN Suganthan, R Sowdhamini, S Chakrabarti
Nucleic acids research 36 (suppl 1), D218-D221, 2008
242008
Cholesterol lowering drug may influence cellular immune response by altering MHC II function
K Roy, M Ghosh, TK Pal, S Chakrabarti, S Roy
Journal of lipid research, jlr. M041954, 2013
222013
SPEER-SERVER: a web server for prediction of protein specificity determining sites
A Chakraborty, S Mandloi, CJ Lanczycki, AR Panchenko, S Chakrabarti
Nucleic Acids Research 40 (W1), W242-W248, 2012
212012
SMoS: a database of structural motifs of protein superfamilies
S Chakrabarti, K Venkatramanan, R Sowdhamini
Protein engineering 16 (11), 791-793, 2003
212003
Regions of minimal structural variation among members of protein domain superfamilies: application to remote homology detection and modelling using distant relationships
S Chakrabarti, R Sowdhamini
FEBS letters 569 (1-3), 31-36, 2004
202004
Ubiquitin Ligase COP1 Controls Hepatic Fat Metabolism by Targeting ATGL for Degradation
M Ghosh, S Niyogi, M Bhattacharyya, M Adak, DK Nayak, S Chakrabarti, ...
Diabetes, db160506, 2016
192016
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