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Nico Scherf
Nico Scherf
Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
Verified email at tu-dresden.de - Homepage
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Cited by
Cited by
Year
High-speed panoramic light-sheet microscopy reveals global endodermal cell dynamics
B Schmid, G Shah, N Scherf, M Weber, K Thierbach, CP Campos, ...
Nature communications 4 (1), 2207, 2013
1892013
The smart and gentle microscope
N Scherf, J Huisken
Nature biotechnology 33 (8), 815-818, 2015
1062015
Developing 3D microscopy with CLARITY on human brain tissue: Towards a tool for informing and validating MRI-based histology
M Morawski, E Kirilina, N Scherf, C Jäger, K Reimann, R Trampel, ...
Neuroimage 182, 417-428, 2018
1002018
In vivo time-lapse imaging shows diverse niche engagement by quiescent and naturally activated hematopoietic stem cells
NM Rashidi, MK Scott, N Scherf, A Krinner, JS Kalchschmidt, K Gounaris, ...
Blood, The Journal of the American Society of Hematology 124 (1), 79-83, 2014
662014
Cell-accurate optical mapping across the entire developing heart
M Weber, N Scherf, AM Meyer, D Panakova, P Kohl, J Huisken
elife 6, e28307, 2017
542017
Multi-scale imaging and analysis identify pan-embryo cell dynamics of germlayer formation in zebrafish
G Shah, K Thierbach, B Schmid, J Waschke, A Reade, M Hlawitschka, ...
Nature communications 10 (1), 5753, 2019
462019
On the symmetry of siblings: automated single-cell tracking to quantify the behavior of hematopoietic stem cells in a biomimetic setup
N Scherf, K Franke, I Glauche, I Kurth, M Bornhäuser, C Werner, T Pompe, ...
Experimental hematology 40 (2), 119-130. e9, 2012
382012
Imaging, quantification and visualization of spatio-temporal patterning in mESC colonies under different culture conditions
N Scherf, M Herberg, K Thierbach, T Zerjatke, T Kalkan, P Humphreys, ...
Bioinformatics 28 (18), i556-i561, 2012
302012
Quantitative analysis of astrogliosis in drug-dependent humans
M Weber, N Scherf, T Kahl, UD Braumann, P Scheibe, JP Kuska, R Bayer, ...
Brain research 1500, 72-87, 2013
292013
Nimodipine enhances neurite outgrowth in dopaminergic brain slice co-cultures
K Sygnecka, C Heine, N Scherf, M Fasold, H Binder, C Scheller, H Franke
International Journal of Developmental Neuroscience 40, 1-11, 2015
212015
Ontology patterns for the representation of quality changes of cells in time
P Burek, N Scherf, H Herre
Journal of biomedical semantics 10, 1-18, 2019
202019
P2Y1 receptor mediated neuronal fibre outgrowth in organotypic brain slice co-cultures
C Heine, K Sygnecka, N Scherf, M Grohmann, A Bräsigk, H Franke
Neuropharmacology 93, 252-266, 2015
202015
Large histological serial sections for computational tissue volume reconstruction
UD Braumann, N Scherf, J Einenkel, LC Horn, N Wentzensen, M Loeffler, ...
Methods of Information in Medicine 46 (05), 614-622, 2007
192007
Single cell phenotyping reveals heterogeneity among hematopoietic stem cells following infection
AL MacLean, MA Smith, J Liepe, A Sim, R Khorshed, NM Rashidi, ...
Stem Cells 35 (11), 2292-2304, 2017
182017
Phosphodiesterase 2 inhibitors promote axonal outgrowth in organotypic slice co-cultures
C Heine, K Sygnecka, N Scherf, A Berndt, U Egerland, T Hage, H Franke
Neurosignals 21 (3-4), 197-212, 2013
172013
Forensic age estimation with Bayesian convolutional neural networks based on panoramic dental X-ray imaging
W De Back, S Seurig, S Wagner, B Marré, I Roeder, N Scherf
142019
Factor graph analysis of live cell–imaging data reveals mechanisms of cell fate decisions
T Niederberger, H Failmezger, D Uskat, D Poron, I Glauche, N Scherf, ...
Bioinformatics 31 (11), 1816-1823, 2015
132015
Mesenchymal stem cells support neuronal fiber growth in an organotypic brain slice co-culture model
K Sygnecka, A Heider, N Scherf, R Alt, H Franke, C Heine
Stem Cells and Development 24 (7), 824-835, 2015
132015
Domain-specific cues improve robustness of deep learning-based segmentation of CT volumes
M Kloenne, S Niehaus, L Lampe, A Merola, J Reinelt, I Roeder, N Scherf
Scientific reports 10 (1), 10712, 2020
112020
Combining deep learning and active contours opens the way to robust, automated analysis of brain cytoarchitectonics
K Thierbach, PL Bazin, W Back, F Gavriilidis, E Kirilina, C Jäger, ...
Machine Learning in Medical Imaging: 9th International Workshop, MLMI 2018 …, 2018
11*2018
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