The optimization of mRNA expression level by its intrinsic properties—insights from codon usage pattern and structural stability of mRNA MP Victor, D Acharya, T Begum, TC Ghosh Genomics 111 (6), 1292-1297, 2019 | 27 | 2019 |
Special care is needed in applying phylogenetic comparative methods to gene trees with speciation and duplication nodes T Begum, M Robinson-Rechavi Molecular biology and evolution 38 (4), 1614-1626, 2021 | 12 | 2021 |
Insights into the evolutionary features of human neurodegenerative diseases A Panda, T Begum, TC Ghosh PLoS One 7 (10), e48336, 2012 | 12 | 2012 |
Understanding the effect of secondary structures and aggregation on human protein folding class evolution T Begum, TC Ghosh Journal of molecular evolution 71, 60-69, 2010 | 10 | 2010 |
Systematic analyses and prediction of human drug side effect associated proteins from the perspective of protein evolution T Begum, TC Ghosh, S Basak Genome biology and evolution 9 (2), 337-350, 2017 | 8 | 2017 |
Codon usage bias is not significantly different between the high and the low expression genes in human SS Satapathy, SK Ray, AK Sahoo, T Begum, TC Ghosh Int. J. Mol. Genet. Gene Ther 1 (1), 2015 | 8 | 2015 |
Elucidating the genotype–phenotype relationships and network perturbations of human shared and specific disease genes from an evolutionary perspective T Begum, TC Ghosh Genome Biology and Evolution 6 (10), 2741-2753, 2014 | 6 | 2014 |
Performance of a phylogenetic independent contrast method and an improved pairwise comparison under different scenarios of trait evolution after speciation and duplication T Begum, ML Serrano-Serrano, M Robinson-Rechavi Methods in Ecology and Evolution 12 (10), 1875-1887, 2021 | 5 | 2021 |
Insights into eukaryotic interacting protein evolution S Chakraborty, S Podder, B Kahali, T Begum, K Sen, TC Ghosh Evolutionary Biology–Concepts, Biodiversity, Macroevolution and Genome …, 2011 | 3 | 2011 |
Phylogenetic comparative methods are problematic when applied to gene trees with speciation and duplication nodes: correcting for biases in testing the ortholog conjecture T Begum, M Robinson-Rechavi bioRxiv, 719336, 2019 | 1 | 2019 |
Global and local genomic features together modulate the spontaneous single nucleotide mutation rate A Ajay, T Begum, A Arya, K Kumar, S Ahmad Computational Biology and Chemistry 112, 108107, 2024 | | 2024 |
Sudden shifts in expression after small-scale duplication in vertebrates and strong support for the ortholog conjecture T Begum, P Duchen, CF Bucao, M Robinson-Rechavi bioRxiv, 2023.12. 29.571877, 2023 | | 2023 |
Analysis and Prediction of Pathogen Nucleic Acid Specificity for Toll-like Receptors in Vertebrates A Jain, T Begum, S Ahmad Journal of Molecular Biology 435 (17), 168208, 2023 | | 2023 |
Structural and genomic analysis of human disease and non-disease genes from the perspective of protein evolution T Begum Kolkata, 2015 | | 2015 |
Bioinformatics Centre, Bose Institute, P 1/12, CIT Scheme VII M, Kolkata-700 054, India T Begum, TC Ghosh | | 2014 |
Analysis and Prediction of Strand Specificity for Pathogenic Nucleic Acid Sensing Toll-Like Receptors in Vertebrates A Jain, S Ahmad, T Begum Available at SSRN 4372927, 0 | | |