Athi N Naganathan

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Victor MuñozUniversity of California MercedVerified email at ucmerced.edu
Soundhararajan GopiPost-doctoral Researcher, Kyoto UniversityVerified email at kyoto-u.ac.jp
Jose M. Sanchez-RuizUniversidad de Granada (Spain)Verified email at ugr.es
Abhishek NarayanPost Doctoral FellowVerified email at ualberta.ca
Sneha MunshiPostdoctoral FellowVerified email at ualberta.ca
Modesto OrozcoProfessor of Biochemistry, Universtity of BarcelonaVerified email at irbbarcelona.org
Raul Perez-JimenezProfessor at CIC bioGUNEVerified email at cicbiogune.es
Urmi DoshiSenior Research AssociateVerified email at gsu.edu
Angel Luis PeyAssociate Professor, Department of Physical Chemistry, Universidad de Granada (Spain)Verified email at ugr.es
Sayan RanuIIT DelhiVerified email at iitd.ac.in
Ashok SekharAssistant Professor, Indian Institute of Science Bangalore, IndiaVerified email at iisc.ac.in
Mourad SadqiProject Scientist, University of California, Merced, USAVerified email at ucmerced.edu
Petr ManInstitute of MicrobiologyVerified email at biomed.cas.cz
B Ibarra-MoleroUniversidad de GranadaVerified email at ugr.es
David De SanchoRamón y Cajal Fellow, EHU-UPVVerified email at ehu.eus
Kabita BhattacharjeeResearch scholar, IIT-Madras, Tamil Nadu- IndiaVerified email at smail.iitm.ac.in
Adithi KannanResearch Scholar, Indian Institute of Technology, MadrasVerified email at smail.iitm.ac.in
David FushmanVerified email at umd.edu
Divya RajendranIndian Institute of Technology, MadrasVerified email at smail.iitm.ac.in
Fabiana OlivaPhD in Chemistry Associate researcher CONICET (Instituto de Investigaciones en Físico-Química deVerified email at unc.edu.ar

Athi N Naganathan

Associate Professor, Indian Institute of Technology Madras, Chennai, India

Verified email at iitm.ac.in - Homepage

Protein Structure-Function-Folding Statistical Models Molecular Simulations Spectroscopy


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Scaling of folding times with protein size AN Naganathan, V Muñoz Journal of the American Chemical Society 127 (2), 480-481, 2005	195	2005
Protein folding kinetics: Barrier effects in chemical and thermal denaturation experiments AN Naganathan, U Doshi, V Muñoz Journal of the American Chemical Society 129 (17), 5673-5682, 2007	128	2007
Insights into protein folding mechanisms from large scale analysis of mutational effects AN Naganathan, V Muñoz Proceedings of the National Academy of Sciences 107 (19), 8611-8616, 2010	103	2010
Dynamics, energetics, and structure in protein folding AN Naganathan, U Doshi, A Fung, M Sadqi, V Muñoz Biochemistry 45 (28), 8466-8475, 2006	102	2006
Dynamics of one-state downhill protein folding P Li, FY Oliva, AN Naganathan, V Muñoz Proceedings of the National Academy of Sciences 106 (1), 103-108, 2009	99	2009
Robustness of downhill folding: guidelines for the analysis of equilibrium folding experiments on small proteins AN Naganathan, R Perez-Jimenez, JM Sanchez-Ruiz, V Munoz Biochemistry 44 (20), 7435-7449, 2005	98	2005
Direct measurement of barrier heights in protein folding AN Naganathan, JM Sanchez-Ruiz, V Munoz Journal of the American Chemical Society 127 (51), 17970-17971, 2005	83	2005
Modulation of allosteric coupling by mutations: from protein dynamics and packing to altered native ensembles and function AN Naganathan Current opinion in structural biology 54, 1-9, 2019	75	2019
The native ensemble and folding of a protein molten-globule: functional consequence of downhill folding AN Naganathan, M Orozco Journal of the American Chemical Society 133 (31), 12154-12161, 2011	62	2011
Modern analysis of protein folding by differential scanning calorimetry B Ibarra-Molero, AN Naganathan, JM Sanchez-Ruiz, V Muñoz Methods in enzymology 567, 281-318, 2016	61	2016
Predictions from an Ising-like statistical mechanical model on the dynamic and thermodynamic effects of protein surface electrostatics AN Naganathan Journal of chemical theory and computation 8 (11), 4646-4656, 2012	55	2012
A general mechanism for the propagation of mutational effects in proteins N Rajasekaran, S Suresh, S Gopi, K Raman, AN Naganathan Biochemistry 56 (1), 294-305, 2017	48	2017
Direct observation of downhill folding of λ-repressor in a microfluidic mixer SJ DeCamp, AN Naganathan, SA Waldauer, O Bakajin, LJ Lapidus Biophysical Journal 97 (6), 1772-1777, 2009	42	2009
Navigating the downhill protein folding regime via structural homologues AN Naganathan, P Li, R Perez-Jimenez, JM Sanchez-Ruiz, V Munoz Journal of the American Chemical Society 132 (32), 11183-11190, 2010	40	2010
Quantitative prediction of protein folding behaviors from a simple statistical model P Bruscolini, AN Naganathan Journal of the American Chemical Society 133 (14), 5372-5379, 2011	38	2011
A universal pattern in the percolation and dissipation of protein structural perturbations N Rajasekaran, A Sekhar, AN Naganathan The journal of physical chemistry letters 8 (19), 4779-4784, 2017	37	2017
Thermodynamics of downhill folding: multi-probe analysis of PDD, a protein that folds over a marginal free energy barrier AN Naganathan, V Muñoz The Journal of Physical Chemistry B 118 (30), 8982-8994, 2014	35	2014
Coarse-grained representation of protein flexibility. Foundations, successes, and shortcomings M Orozco, L Orellana, A Hospital, AN Naganathan, A Emperador, ... Advances in Protein Chemistry and Structural Biology 85, 183-215, 2011	33	2011
A rapid, ensemble and free energy based method for engineering protein stabilities AN Naganathan The Journal of Physical Chemistry B 117 (17), 4956-4964, 2013	32	2013
Estimation of protein folding free energy barriers from calorimetric data by multi-model Bayesian analysis AN Naganathan, R Perez-Jimenez, V Muñoz, JM Sanchez-Ruiz Physical Chemistry Chemical Physics 13 (38), 17064-17076, 2011	30	2011

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