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Rahul Siddharthan
Rahul Siddharthan
Verified email at imsc.res.in - Homepage
Title
Cited by
Cited by
Year
Zero-point entropy in ‘spin ice’
AP Ramirez, A Hayashi, RJ Cava, R Siddharthan, BS Shastry
Nature 399 (6734), 333-335, 1999
13811999
PhyloGibbs: a Gibbs sampling motif finder that incorporates phylogeny
R Siddharthan, ED Siggia, E Van Nimwegen
PLoS computational biology 1 (7), e67, 2005
3452005
Ising pyrochlore magnets: Low-temperature properties,“ice rules,” and beyond
R Siddharthan, BS Shastry, AP Ramirez, A Hayashi, RJ Cava, ...
Physical review letters 83 (9), 1854, 1999
3101999
Crystal-field interaction in the pyrochlore magnet
S Rosenkranz, AP Ramirez, A Hayashi, RJ Cava, R Siddharthan, ...
Journal of Applied Physics 87 (9), 5914-5916, 2000
2142000
Dinucleotide weight matrices for predicting transcription factor binding sites: generalizing the position weight matrix
R Siddharthan
PloS one 5 (3), e9722, 2010
1122010
Rapid evolution of Cse4p-rich centromeric DNA sequences in closely related pathogenic yeasts, Candida albicans and Candida dubliniensis
S Padmanabhan, J Thakur, R Siddharthan, K Sanyal
Proceedings of the National Academy of Sciences 105 (50), 19797-19802, 2008
842008
Spin ordering and partial ordering in holmium titanate and related systems
R Siddharthan, BS Shastry, AP Ramirez
Physical Review B 63 (18), 184412, 2001
652001
Repeat-Associated Fission Yeast-Like Regional Centromeres in the Ascomycetous Budding Yeast Candida tropicalis
G Chatterjee, SR Sankaranarayanan, K Guin, Y Thattikota, ...
PLoS genetics 12 (2), e1005839, 2016
542016
Square kagome quantum antiferromagnet and the eight-vertex model
R Siddharthan, A Georges
Physical Review B 65 (1), 014417, 2001
502001
Proteogenomics produces comprehensive and highly accurate protein-coding gene annotation in a complete genome assembly of Malassezia sympodialis
Y Zhu, PG Engström, C Tellgren-Roth, CD Baudo, JC Kennell, S Sun, ...
Nucleic Acids Research 45 (5), 2629-2643, 2017
402017
Gene expression from random libraries of yeast promoters
M Ligr, R Siddharthan, FR Cross, ED Siggia
Genetics 172 (4), 2113-2122, 2006
362006
PhyloGibbs-MP: module prediction and discriminative motif-finding by Gibbs sampling
R Siddharthan
PLoS computational biology 4 (8), e1000156, 2008
342008
Dynamical mean-field theory of resonating-valence-bond antiferromagnets
A Georges, R Siddharthan, S Florens
Physical review letters 87 (27), 277203, 2001
322001
Sigma: multiple alignment of weakly-conserved non-coding DNA sequence
R Siddharthan
BMC bioinformatics 7 (1), 1-15, 2006
302006
Loss of centromere function drives karyotype evolution in closely related Malassezia species
SR Sankaranarayanan, G Ianiri, MA Coelho, MH Reza, BC Thimmappa, ...
Elife 9, e53944, 2020
282020
The TAF9 C-terminal conserved region domain is required for SAGA and TFIID promoter occupancy to promote transcriptional activation
M Saint, S Sawhney, I Sinha, RP Singh, R Dahiya, A Thakur, ...
Molecular and cellular biology 34 (9), 1547-1563, 2014
182014
Singularities in the Bethe solution of the XXX and XXZ Heisenberg spin chains
R Siddharthan
arXiv preprint cond-mat/9804210, 1998
181998
PhyloGibbs: A Gibbs sampler incorporating phylogenetic information
R Siddharthan, E Nimwegen, ED Siggia
RECOMB Workshop on Regulatory Genomics, 30-41, 2004
142004
Detecting regulatory sites using PhyloGibbs
R Siddharthan, E Nimwegen
Comparative Genomics, 381-402, 2007
132007
The Complex Spatio-Temporal Regulation of the Drosophila Myoblast Attractant Gene duf/kirre
KG Guruharsha, M Ruiz-Gomez, HA Ranganath, R Siddharthan, ...
PLoS One 4 (9), e6960, 2009
122009
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