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Josh Horton
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QUBEKit: Automating the derivation of force field parameters from quantum mechanics
JT Horton, AEA Allen, LS Dodda, DJ Cole
Journal of chemical information and modeling 59 (4), 1366-1381, 2019
992019
Spice, a dataset of drug-like molecules and peptides for training machine learning potentials
P Eastman, PK Behara, DL Dotson, R Galvelis, JE Herr, JT Horton, Y Mao, ...
Scientific Data 10 (1), 11, 2023
422023
Development and benchmarking of open force field 2.0. 0: the Sage small molecule force field
S Boothroyd, PK Behara, OC Madin, DF Hahn, H Jang, V Gapsys, ...
Journal of chemical theory and computation 19 (11), 3251-3275, 2023
382023
Quantum chemistry common driver and databases (QCDB) and quantum chemistry engine (QCEngine): Automation and interoperability among computational chemistry programs
DGA Smith, AT Lolinco, ZL Glick, J Lee, A Alenaizan, TA Barnes, ...
The Journal of chemical physics 155 (20), 2021
262021
The future of force fields in computer-aided drug design
DJ Cole, JT Horton, L Nelson, V Kurdekar
Future Medicinal Chemistry 11 (18), 2359-2363, 2019
212019
Open force field BespokeFit: automating bespoke torsion parametrization at scale
JT Horton, S Boothroyd, J Wagner, JA Mitchell, T Gokey, DL Dotson, ...
Journal of chemical information and modeling 62 (22), 5622-5633, 2022
172022
Mace-off23: Transferable machine learning force fields for organic molecules
DP Kovács, JH Moore, NJ Browning, I Batatia, JT Horton, V Kapil, ...
arXiv preprint arXiv:2312.15211, 2023
82023
Collaborative assessment of molecular geometries and energies from the Open Force Field
L D’Amore, DF Hahn, DL Dotson, JT Horton, J Anwar, I Craig, T Fox, ...
Journal of chemical information and modeling 62 (23), 6094-6104, 2022
82022
Modeling Molecular Emitters in Organic Light-Emitting Diodes with the Quantum Mechanical Bespoke Force Field
L Yang, JT Horton, MC Payne, TJ Penfold, DJ Cole
Journal of Chemical Theory and Computation 17 (8), 5021-5033, 2021
82021
Modelling flexible protein–ligand binding in p38α MAP kinase using the QUBE force field
JT Horton, AEA Allen, DJ Cole
Chemical communications 56 (6), 932-935, 2020
82020
Exploration and validation of force field design protocols through QM-to-MM mapping
C Ringrose, JT Horton, LP Wang, DJ Cole
Physical Chemistry Chemical Physics 24 (28), 17014-17027, 2022
72022
Implementation of the QUBE force field in SOMD for high-throughput alchemical free-energy calculations
L Nelson, S Bariami, C Ringrose, JT Horton, V Kurdekar, ASJS Mey, ...
Journal of Chemical Information and Modeling 61 (5), 2124-2130, 2021
62021
A transferable double exponential potential for condensed phase simulations of small molecules
JT Horton, S Boothroyd, PK Behara, DL Mobley, DJ Cole
Digital Discovery 2 (4), 1178-1187, 2023
32023
An open-source molecular builder and free energy preparation workflow
MK Bieniek, B Cree, R Pirie, JT Horton, NJ Tatum, DJ Cole
Communications chemistry 5 (1), 136, 2022
22022
Development and benchmarking of an open, self-consistent force field for proteins and small molecules from the open force field initiative
CE Cavender, PK Behara, S Boothroyd, DL Dotson, JT Horton, JA Mitchell, ...
Biophysical Journal 122 (3), 421a, 2023
12023
Research data supporting" MACE-OFF23"
H Moore, DP Kovacs, NJ Browning, I Batatia, JT Horton, V Kapil, W Witt, ...
2024
Benchmarking Quantum Mechanical Levels of Theory for Valence Parametrization in Force Fields
PK Behara, H Jang, J Horton, T Gokey, D Dotson, S Boothroyd, C Bayly, ...
2024
Development and benchmarking of a self-consistent force field for proteins and small molecules from open force field
CE Cavender, PK Behara, DL Dotson, AJ Friedman, T Gokey, JT Horton, ...
Biophysical Journal 123 (3), 421a, 2024
2024
MACE-OFF23: Transferable Machine Learning Force Fields for Organic Molecules
D Péter Kovács, JH Moore, NJ Browning, I Batatia, JT Horton, V Kapil, ...
arXiv e-prints, arXiv: 2312.15211, 2023
2023
Fast, conformation-independent charges with graph convolutional networks
L Wang, S Boothroyd, JT Horton, MW Thompson, MR Shirts, DJ Cole, ...
Biophysical journal 122 (3), 36a, 2023
2023
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