PDBSite: a database of the 3D structure of protein functional sites VA Ivanisenko, SS Pintus, DA Grigorovich, NA Kolchanov Nucleic Acids Research 33 (suppl_1), D183-D187, 2005 | 117 | 2005 |
PDBSiteScan: a program for searching for active, binding and posttranslational modification sites in the 3D structures of proteins VA Ivanisenko, SS Pintus, DA Grigorovich, NA Kolchanov Nucleic acids research 32 (suppl_2), W549-W554, 2004 | 102 | 2004 |
BioUML: an integrated environment for systems biology and collaborative analysis of biomedical data F Kolpakov, I Akberdin, T Kashapov, L Kiselev, S Kolmykov, Y Kondrakhin, ... Nucleic acids research 47 (W1), W225-W233, 2019 | 51 | 2019 |
The substitutions G245C and G245D in the Zn2+-binding pocket of the p53 protein result in differences of conformational flexibility of the DNA-binding domain SS Pintus, NV Ivanisenko, PS Demenkov, TV Ivanisenko, ... Journal of Biomolecular Structure and Dynamics 31 (1), 78-86, 2013 | 25 | 2013 |
Role of phagocytosis in the pro-inflammatory response in LDL-induced foam cell formation; a transcriptome analysis AN Orekhov, NG Nikiforov, VN Sukhorukov, MV Kubekina, IA Sobenin, ... International journal of molecular sciences 21 (3), 817, 2020 | 24 | 2020 |
Signaling pathways potentially responsible for foam cell formation: cholesterol accumulation or inflammatory response—What is first? AN Orekhov, VN Sukhorukov, NG Nikiforov, MV Kubekina, IA Sobenin, ... International Journal of Molecular Sciences 21 (8), 2716, 2020 | 19 | 2020 |
Computational master-regulator search reveals mTOR and PI3K pathways responsible for low sensitivity of NCI-H292 and A427 lung cancer cell lines to cytotoxic action of p53 … U Boyarskikh, S Pintus, N Mandrik, D Stelmashenko, I Kiselev, I Evshin, ... BMC medical genomics 11, 43-59, 2018 | 19 | 2018 |
Phylogenetic analysis of the p53 and p63/p73 gene families SS Pintus, ES Fomin, IS Oshurkov, VA Ivanisenko In silico biology 7 (3), 319-332, 2007 | 18 | 2007 |
Expression and molecular characterization of the Mycobacterium tuberculosis PII protein A Bandyopadhyay, A Arora, S Jain, A Laskar, C Mandal, VA Ivanisenko, ... Journal of biochemistry 147 (2), 279-289, 2010 | 15 | 2010 |
A modular mathematical model of exercise-induced changes in metabolism, signaling, and gene expression in human skeletal muscle IR Akberdin, IN Kiselev, SS Pintus, RN Sharipov, AY Vertyshev, ... International Journal of Molecular Sciences 22 (19), 10353, 2021 | 14 | 2021 |
BioUML—Towards a universal research platform F Kolpakov, I Akberdin, I Kiselev, S Kolmykov, Y Kondrakhin, M Kulyashov, ... Nucleic Acids Research 50 (W1), W124-W131, 2022 | 11 | 2022 |
Computer analysis of metagenomic data--Pediction of quantitative value of specific activity of proteins VA Ivanisenko, PS Demenkov, SS Pintus, TV Ivanisenko, NL Podkolodny, ... Doklady. Biochemistry and Biophysics 443 (1), 76, 2012 | 7 | 2012 |
Phylogenetic analysis of the family of p53 SS Pintus, ES Fomin, VA Ivanisenko, NA Kolchanov Biofizika 51 (4), 640-649, 2006 | 7 | 2006 |
A mathematical model linking Ca2+-dependent signaling pathway and gene expression regulation in human skeletal muscle IR Akberdin, SS Pintus, FA Kolpakov, AY Vertyshev, DV Popov Математическая биология и биоинформатика 15 (1), 20-39, 2020 | 6 | 2020 |
Development of a computer system for the automated reconstruction of molecular genetic interaction networks EE Aman, PS Demenkov, SS Pintus, AI Nemiatov, NV Apasieva, ... Fifth International Conference on Bioinformatics of Genome Regulation and …, 2006 | 6 | 2006 |
Genome-wide atlas of promoter expression reveals contribution of transcribed regulatory elements to genetic control of disuse-mediated atrophy of skeletal muscle SS Pintus, IR Akberdin, I Yevshin, P Makhnovskii, O Tyapkina, ... Biology 10 (6), 557, 2021 | 4 | 2021 |
Associative network and protein structure discovery: a software complex for facilitating search of targets for drugs, drug design, and evaluation of molecular toxicity VA Ivanisenko, PS Demenkov, EE Aman, SS Pintus, NA Kolchanov 3rd International conference “Basic science for medicine 92, 2007 | 4 | 2007 |
Phylogenetic analysis of the p53 family SS Pintus, ES Fomin, VA Ivanisenko, NA Kolchanov Biophysics 51, 571-580, 2006 | 3 | 2006 |
Signaling pathways potentially responsible for foam cell formation: Cholesterol accumulation or inflammatory response-What is primary? VN Sukhorukov, NG Nikiforov, M Kubekina, IA Sobenin, KK Foxx, ... Atherosclerosis 315, e58, 2020 | 1 | 2020 |
FASTPROT: a computational workbench for recognition of the structural and functional determinants in protein tertiary structures VA Ivanisenko, SS Pintus, PS Demenkov, MA Krestyanova, EK Litvenko, ... Bioinformatics of Genome Regulation and Structure II, 305-316, 2006 | 1 | 2006 |