Structure and complexity of a bacterial transcriptome KD Passalacqua, A Varadarajan, BD Ondov, DT Okou, ME Zwick, ... Journal of bacteriology 191 (10), 3203-3211, 2009 | 276 | 2009 |
Efficient mapping of Applied Biosystems SOLiD sequence data to a reference genome for functional genomic applications BD Ondov, A Varadarajan, KD Passalacqua, NH Bergman Bioinformatics 24 (23), 2776-2777, 2008 | 154 | 2008 |
Biosynthetic Analysis of the Petrobactin Siderophore Pathway from Bacillusanthracis JY Lee, BK Janes, KD Passalacqua, BF Pfleger, NH Bergman, H Liu, ... Journal of bacteriology 189 (5), 1698-1710, 2007 | 132 | 2007 |
Bacterial metabolism shapes the host–pathogen interface KD Passalacqua, ME Charbonneau, MXD O'riordan Virulence Mechanisms of Bacterial Pathogens, 15-41, 2016 | 97 | 2016 |
Astrovirus replication in human intestinal enteroids reveals multi-cellular tropism and an intricate host innate immune landscape AO Kolawole, C Mirabelli, DR Hill, SA Svoboda, AB Janowski, ... PLoS pathogens 15 (10), e1008057, 2019 | 76 | 2019 |
Regulation of petrobactin and bacillibactin biosynthesis in Bacillus anthracis under iron and oxygen variation JY Lee, KD Passalacqua, PC Hanna, DH Sherman PLoS One 6 (6), e20777, 2011 | 69 | 2011 |
Murine Macrophage Transcriptional Responses to Bacillus anthracis Infection and Intoxication NH Bergman, KD Passalacqua, R Gaspard, LM Shetron-Rama, ... Infection and immunity 73 (2), 1069-1080, 2005 | 67 | 2005 |
The Superoxide Dismutases of Bacillus anthracis Do Not Cooperatively Protect against Endogenous Superoxide Stress KD Passalacqua, NH Bergman, A Herring-Palmer, P Hanna Journal of bacteriology 188 (11), 3837-3848, 2006 | 66 | 2006 |
A mutation in the PP2C phosphatase gene in a Staphylococcus aureus USA300 clinical isolate with reduced susceptibility to vancomycin and daptomycin KD Passalacqua, SW Satola, EK Crispell, TD Read Antimicrobial agents and chemotherapy 56 (10), 5212-5223, 2012 | 64 | 2012 |
Global mRNA decay analysis at single nucleotide resolution reveals segmental and positional degradation patterns in a Gram-positive bacterium SM Kristoffersen, C Haase, MR Weil, KD Passalacqua, F Niazi, ... Genome biology 13, 1-21, 2012 | 61 | 2012 |
Bacillus anthracis genome organization in light of whole transcriptome sequencing J Martin, W Zhu, KD Passalacqua, N Bergman, M Borodovsky BMC bioinformatics 11, 1-13, 2010 | 61 | 2010 |
Glycolysis is an intrinsic factor for optimal replication of a norovirus KD Passalacqua, J Lu, I Goodfellow, AO Kolawole, JR Arche, RJ Maddox, ... MBio 10 (2), 10.1128/mbio. 02175-18, 2019 | 60 | 2019 |
Transcriptomic and phylogenetic analysis of a bacterial cell cycle reveals strong associations between gene co-expression and evolution JWC Fang G, Passalacqua KD, Hocking J, Llopis PM BMC Genomics 14 (1), 450, 2013 | 58* | 2013 |
Inactivation of murine norovirus and fecal coliforms by ferrate (VI) in secondary effluent wastewater K Manoli, R Maffettone, VK Sharma, D Santoro, AK Ray, KD Passalacqua, ... Environmental Science & Technology 54 (3), 1878-1888, 2019 | 56 | 2019 |
Bacillus anthracis: interactions with the host and establishment of inhalational anthrax KD Passalacqua, NH Bergman Future Medicine Ltd 1 (4), 397-415, 2006 | 56 | 2006 |
Operon prediction for sequenced bacterial genomes without experimental information NH Bergman, KD Passalacqua, PC Hanna, ZS Qin Applied and environmental microbiology 73 (3), 846-854, 2007 | 55 | 2007 |
The Global Transcriptional Responses of Bacillus anthracis Sterne (34F2) and a ΔsodA1 Mutant to Paraquat Reveal Metal Ion Homeostasis Imbalances during … KD Passalacqua, NH Bergman, JY Lee, DH Sherman, PC Hanna Journal of bacteriology 189 (11), 3996-4013, 2007 | 48 | 2007 |
Strand-Specific RNA-Seq Reveals Ordered Patterns of Sense and Antisense Transcription in Bacillus anthracis KD Passalacqua, A Varadarajan, C Weist, BD Ondov, B Byrd, TD Read, ... Public Library of Science 7 (8), e43350, 2012 | 41 | 2012 |
Comparative Transcriptional Profiling of Bacillus cereus Sensu Lato Strains during Growth in CO2-Bicarbonate and Aerobic Atmospheres KD Passalacqua, A Varadarajan, B Byrd, NH Bergman PLoS One 4 (3), e4904, 2009 | 40 | 2009 |
The mitochondrial fission regulator DRP1 controls post-transcriptional regulation of TNF-α F Gao, MB Reynolds, KD Passalacqua, JZ Sexton, BH Abuaita, ... Frontiers in cellular and infection microbiology 10, 593805, 2021 | 29 | 2021 |