| RNA structural dynamics as captured by molecular simulations: a comprehensive overview J Sponer, G Bussi, M Krepl, P Banáš, S Bottaro, RA Cunha, A Gil-Ley, ... Chemical reviews 118 (8), 4177-4338, 2018 | 460 | 2018 |
| Barnaba: software for analysis of nucleic acid structures and trajectories S Bottaro, G Bussi, G Pinamonti, S Reißer, W Boomsma, K Lindorff-Larsen Rna 25 (2), 219-231, 2019 | 61 | 2019 |
| Elastic network models for RNA: a comparative assessment with molecular dynamics and SHAPE experiments G Pinamonti, S Bottaro, C Micheletti, G Bussi Nucleic acids research 43 (15), 7260-7269, 2015 | 50 | 2015 |
| Learning effective molecular models from experimental observables J Chen, J Chen, G Pinamonti, C Clementi Journal of chemical theory and computation 14 (7), 3849-3858, 2018 | 40 | 2018 |
| Predicting the kinetics of RNA oligonucleotides using Markov state models G Pinamonti, J Zhao, DE Condon, F Paul, F Noè, DH Turner, G Bussi Journal of chemical theory and computation 13 (2), 926-934, 2017 | 35 | 2017 |
| The mechanism of RNA base fraying: Molecular dynamics simulations analyzed with core-set Markov state models G Pinamonti, F Paul, F Noé, A Rodriguez, G Bussi The Journal of chemical physics 150 (15), 2019 | 31 | 2019 |
| Stochastic resonance crossovers in complex networks G Pinamonti, J Marro, JJ Torres PloS one 7 (12), e51170, 2012 | 20 | 2012 |
| The Effect of Electrostatic Interactions on the Folding Kinetics of a 3-α-Helical Bundle Protein Family FM Yrazu, G Pinamonti, C Clementi The Journal of Physical Chemistry B 122 (49), 11800-11806, 2018 | 3 | 2018 |
| Signal transmission competing with noise in model excitable brains J Marro, JF Mejias, G Pinamonti, JJ Torres AIP Conference Proceedings 1510 (1), 85-93, 2013 | 3 | 2013 |
| Analyze nucleic acids structures and trajectories with barnaba S Bottaro, G Bussi, G Pinamonti, S Reisser, W Boomsma, ... bioRxiv, 345678, 2018 | 2 | 2018 |
| Simulations Reveal Multiple Intermediates in the Unzipping Mechanism of Neuronal SNARE Complex G Pinamonti, G Campo, J Chen, A Kluber, C Clementi Biophysical Journal 115 (8), 1470-1480, 2018 | | 2018 |
| Studying the dynamical properties of small RNA molecules with computational techniques G Pinamonti SISSA, 2016 | | 2016 |
| Studying the kinetic properties of small RNA molecules using Markov state models G Pinamonti, S Bottaro, F Noe, G Bussi ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 251, 2016 | | 2016 |
| RNA Conformational Fluctuations from Elastic Network Models: A Comparison with Molecular Dynamics and Shape Experiments G Pinamonti, S Bottaro, C Micheletti, G Bussi Biophysical Journal 110 (3), 330a, 2016 | | 2016 |
| Elastic network models for RNA: a comparative assessment with molecular dynamics and SHAPE data G Pinamonti, S Bottaro, C Micheletti, G Bussi EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 44, S171-S171, 2015 | | 2015 |
Giovanni BussiScuola Internazionale Superiore di Studi Avanzati, Trieste, ItalyVerified email at sissa.it
