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Prerana Gogoi
Prerana Gogoi
Postdoctoral Fellow, Perelman School of Medicine
Verified email at pennmedicine.upenn.edu
Title
Cited by
Cited by
Year
Dual nuclease activity of a Cas2 protein in CRISPR–Cas subtype I‐B of Leptospira interrogans
B Dixit, KK Ghosh, G Fernandes, P Kumar, P Gogoi, M Kumar
FEBS letters 590 (7), 1002-1016, 2016
312016
Structural basis of purine nucleotide inhibition of human uncoupling protein 1
SA Jones, P Gogoi, JJ Ruprecht, MS King, Y Lee, T Zögg, E Pardon, ...
Science Advances 9 (22), eadh4251, 2023
212023
In silico analysis of 5′-UTRs highlights the prevalence of Shine–Dalgarno and leaderless-dependent mechanisms of translation initiation in bacteria and archaea, respectively
A Srivastava, P Gogoi, B Deka, S Goswami, SP Kanaujia
Journal of Theoretical Biology 402, 54-61, 2016
212016
Designating ligand specificities to metal uptake ABC transporters in Thermus thermophilus HB8
SK Mandal, R Adhikari, A Sharma, M Chandravanshi, P Gogoi, ...
Metallomics 11 (3), 597-612, 2019
192019
Structural and thermodynamic correlation illuminates the selective transport mechanism of disaccharide α‐glycosides through ABC transporter
M Chandravanshi, P Gogoi, SP Kanaujia
The FEBS Journal 287 (8), 1576-1597, 2020
162020
Computational characterization of TTHA0379: A potential glycerophosphocholine binding protein of Ugp ATP-binding cassette transporter
M Chandravanshi, P Gogoi, SP Kanaujia
Gene 592 (2), 260-268, 2016
102016
Heterogeneous behavior of metalloproteins toward metal ion binding and selectivity: insights from molecular dynamics studies
P Gogoi, M Chandravanshi, SK Mandal, A Srivastava, SP Kanaujia
Journal of Biomolecular Structure and Dynamics 34 (7), 1470-1485, 2016
102016
Design of novel PhMTNA inhibitors, targeting neurological disorder through homology modeling, molecular docking, and dynamics approaches
P Jayaprakash, J Biswal, S Kanagarajan, D Prabhu, P Gogoi, ...
Journal of Receptors and Signal Transduction 39 (1), 28-38, 2019
72019
Role of structural features in oligomerization, active-site integrity and ligand binding of ribose-1, 5-bisphosphate isomerase
P Gogoi, SP Kanaujia
Computational and Structural Biotechnology Journal 17, 333-344, 2019
72019
In silico analysis suggests that PH0702 and PH0208 encode for methylthioribose-1-phosphate isomerase and ribose-1, 5-bisphosphate isomerase, respectively, rather than aIF2Bβ …
P Gogoi, A Srivastava, P Jayaprakash, J Jeyakanthan, SP Kanaujia
Gene 575 (1), 118-126, 2016
72016
Structural insights into the catalytic mechanism of 5-methylthioribose 1-phosphate isomerase
P Gogoi, P Mordina, SP Kanaujia
Journal of Structural Biology 205 (1), 67-77, 2019
62019
A presumed homologue of the regulatory subunits of eIF2B functions as ribose-1,5-bisphosphate isomerase in Pyrococcus horikoshii OT3
P Gogoi, SP Kanaujia
Scientific Reports 8 (1), 1891, 2018
62018
Structural and functional characterization of Cas2 of CRISPR-Cas subtype IC lacking the CRISPR component
V Anand, HS Prabhakaran, P Gogoi, SP Kanaujia, M Kumar
Frontiers in Molecular Biosciences 9, 988569, 2022
42022
The core Cas1 protein of CRISPR-Cas IB in Leptospira shows metal-tunable nuclease activity
B Dixit, A Prakash, P Kumar, P Gogoi, M Kumar
Current Research in Microbial Sciences 2, 100059, 2021
42021
Archaeal and eukaryal translation initiation factor 1 differ in their RNA interacting loops
P Gogoi, SP Kanaujia
FEBS letters 592 (9), 1602-1610, 2018
42018
Structural and functional role of invariant water molecules in matrix metalloproteinases: a data-mining approach
H Kumar, SK Mandal, P Gogoi, SP Kanaujia
Journal of Biomolecular Structure and Dynamics 40 (20), 10074-10085, 2022
32022
In silico characterization of TTHA0596: A potential Zn2+ binding protein of ATP-binding cassette transporter
SK Mandal, M Chandravanshi, P Gogoi, SP Kanaujia
Gene Reports 6, 132-141, 2017
32017
Water-mediated structural rearrangement establishes active conformation of caspases for apoptosis and inflammation
A Sharma, P Gogoi, M Chandravanshi, SP Kanaujia
Journal of Biomolecular Structure and Dynamics 40 (13), 6013-6026, 2022
22022
Exploiting the rationale behind substrate recognition by promiscuous thermophilic NDP-sugar pyrophosphorylase for expanding glycorandomization: an in silico study
P Gogoi, P Mordina, SP Kanaujia
Journal of Biomolecular Structure and Dynamics 39 (16), 6099-6111, 2021
12021
Structural understanding of purine nucleotide inhibition of human UCP1 protein
P Gogoi, SA Jones, JJ Ruprecht, MS King, Y Lee, T Zögg, E Pardon, ...
Biophysical Journal 123 (3), 210a, 2024
2024
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