Alpan Raval
Alpan Raval
Wadhwani Institute for Artificial Intelligence
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A single determinant dominates the rate of yeast protein evolution
DA Drummond, A Raval, CO Wilke
Molecular biology and evolution 23 (2), 327-337, 2006
Refinement of protein structure homology models via long, all‐atom molecular dynamics simulations
A Raval, S Piana, MP Eastwood, RO Dror, DE Shaw
Proteins: Structure, Function, and Bioinformatics 80 (8), 2071-2079, 2012
Nonperturbative effects of vacuum energy on the recent expansion of the universe
L Parker, A Raval
Physical Review D 60 (6), 063512, 1999
Identifying hubs in protein interaction networks
RR Vallabhajosyula, D Chakravarti, S Lutfeali, A Ray, A Raval
PloS one 4 (4), e5344, 2009
Thermodynamics of neutral protein evolution
JD Bloom, A Raval, CO Wilke
Genetics 175 (1), 255-266, 2007
Evolution favors protein mutational robustness in sufficiently large populations
JD Bloom, Z Lu, D Chen, A Raval, OS Venturelli, FH Arnold
BMC biology 5, 1-21, 2007
Stochastic theory of accelerated detectors in a quantum field
A Raval, BL Hu, J Anglin
Physical Review D 53 (12), 7003, 1996
New quantum aspects of a vacuum-dominated universe
L Parker, A Raval
Physical Review D 62 (8), 083503, 2000
Vacuum effects of an ultralow mass particle account for the recent acceleration of the universe
L Parker, A Raval
Physical Review D 60 (12), 123502, 1999
Mining protein networks for synthetic genetic interactions
SR Paladugu, S Zhao, A Ray, A Raval
Bmc Bioinformatics 9, 1-14, 2008
A Bayesian network model for protein fold and remote homologue recognition
A Raval, Z Ghahramani, DL Wild
Bioinformatics 18 (6), 788-801, 2002
A new look at the accelerating universe
L Parker, A Raval
Physical Review Letters 86 (5), 749, 2001
Near-thermal radiation in detectors, mirrors, and black holes: A stochastic approach
A Raval, BL Hu, D Koks
Physical Review D 55 (8), 4795, 1997
Detection of genomic islands via segmental genome heterogeneity
AJ Arvey, RK Azad, A Raval, JG Lawrence
Nucleic acids research 37 (16), 5255-5266, 2009
Predicting the tolerance of proteins to random amino acid substitution
CO Wilke, JD Bloom, DA Drummond, A Raval
Biophysical journal 89 (6), 3714-3720, 2005
Proteomic profiling of aging in the mouse heart: altered expression of mitochondrial proteins
B Chakravarti, M Oseguera, N Dalal, P Fathy, B Mallik, A Raval, ...
Archives of biochemistry and biophysics 474 (1), 22-31, 2008
Assessment of the utility of contact‐based restraints in accelerating the prediction of protein structure using molecular dynamics simulations
A Raval, S Piana, MP Eastwood, DE Shaw
Protein Science 25 (1), 19-29, 2016
Introduction to biological networks
A Raval, A Ray, A Raval
CRC Press, 2013
Some asymptotic properties of duplication graphs
A Raval
Physical Review E 68 (6), 066119, 2003
Proteome profiling of aging in mouse models: differential expression of proteins involved in metabolism, transport, and stress response in kidney
B Chakravarti, B Seshi, W Ratanaprayul, N Dalal, L Lin, A Raval, ...
Proteomics 9 (3), 580-597, 2009
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