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Anoushka Joglekar
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SynGO: an evidence-based, expert-curated knowledge base for the synapse
F Koopmans, P van Nierop, M Andres-Alonso, A Byrnes, T Cijsouw, ...
Neuron 103 (2), 217-234. e4, 2019
6442019
Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells
I Gupta, PG Collier, B Haase, A Mahfouz, A Joglekar, T Floyd, ...
Nature biotechnology 36 (12), 1197-1202, 2018
3062018
A spatially resolved brain region-and cell type-specific isoform atlas of the postnatal mouse brain
A Joglekar, A Prjibelski, A Mahfouz, P Collier, S Lin, AK Schlusche, ...
Nature Communications 12 (1), 463, 2021
1622021
Single-nuclei isoform RNA sequencing unlocks barcoded exon connectivity in frozen brain tissue
SA Hardwick*, W Hu*, A Joglekar*, L Fan, PG Collier, C Foord, J Balacco, ...
Nature Biotechnology, 1-11, 2022
812022
Accurate isoform discovery with IsoQuant using long reads
AD Prjibelski, A Mikheenko, A Joglekar, A Smetanin, J Jarroux, ...
Nature Biotechnology 41 (7), 915-918, 2023
632023
Getting the entire message: progress in isoform sequencing
SA Hardwick, A Joglekar, P Flicek, A Frankish, HU Tilgner
Frontiers in genetics 10, 709, 2019
492019
Neuroprotective role of gap junctions in a neuron astrocyte network model
G Huguet, A Joglekar, LM Messi, R Buckalew, S Wong, D Terman
Biophysical journal 111 (2), 452-462, 2016
372016
Sequencing of individual barcoded cDNAs using Pacific Biosciences and Oxford Nanopore Technologies reveals platform-specific error patterns
A Mikheenko, AD Prjibelski, A Joglekar, HU Tilgner
Genome Research 32 (4), 726-737, 2022
232022
Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain
A Joglekar, W Hu, B Zhang, O Narykov, M Diekhans, J Marrocco, ...
Nature neuroscience, 1-13, 2024
20*2024
The variables on RNA molecules: concert or cacophony? Answers in long-read sequencing
C Foord, J Hsu, J Jarroux, W Hu, N Belchikov, S Pollard, Y He, A Joglekar, ...
nature methods 20 (1), 20-24, 2023
172023
ScisorWiz: visualizing differential isoform expression in single-cell long-read data
AN Stein, A Joglekar, CL Poon, HU Tilgner
Bioinformatics 38 (13), 3474-3476, 2022
162022
From words to complete phrases: insight into single-cell isoforms using short and long reads
A Joglekar, C Foord, J Jarroux, S Pollard, HU Tilgner
Transcription 14 (3-5), 92-104, 2023
82023
Comparing 10x Genomics single-cell 3’and 5’assay in short-and long-read sequencing
J Hsu, J Jarroux, A Joglekar, JP Romero, C Nemec, D Reyes, A Royall, ...
BioRxiv, 2022.10. 27.514084, 2022
42022
Predicting cell-type-specific exon inclusion in the human brain reveals more complex splicing mechanisms in neurons than glia
L Michielsen, J Hsu, A Joglekar, N Belchikov, M Reinders, H Tilgner, ...
bioRxiv, 2024.03. 18.585465, 2024
12024
A Cell-Type Centric View of Alternative Splicing in the Mammalian Brain
AP Joglekar
Weill Medical College of Cornell University, 2022
12022
ScISOr-ATAC reveals convergent and divergent splicing and chromatin specificities between matched cell types across cortical regions, evolution, and in Alzheimer’s Disease
W Hu, C Foord, J Hsu, L Fan, MJ Corley, TN Bhatia, S Xu, N Belchikov, ...
bioRxiv, 2024
2024
Research briefing
A Joglekar, HU Tilgner
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Articles 1–17