Akash Ranjan

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Debasish Kumar GhoshResearcher in Biological SciencesVerified email at manipal.edu
Seyed HasnainNational Science Chair, Indian Institute of Technology, DelhiVerified email at bioschool.iitd.ac.in
Sailu YellaboinaAIIMS BibinagarVerified email at crraoaimscs.res.in
ajit royVisiting Fellow at National Institute of HealthVerified email at nih.gov
Rajendra Kumar AngaraPostdoctoral Research Associate,University of Nebraska Medical CenterVerified email at unmc.edu
Vijaykumar MuleyInstitute of Neurobiology, National Autonomous University of México (UNAM), MexicoVerified email at iscb.org
Ashis DasDepartment of Biological Sciences, Birla Institute of Technology & Science, PilaniVerified email at pilani.bits-pilani.ac.in
Niyaz AhmedUniversity of Hyderabad, IndiaVerified email at uohyd.ac.in
Jamshaid AliRajiv Gandhi Centre for Biotechnology, Thiruvananthapuram, Kerala, IndiaVerified email at rgcb.res.in
Uma PailaAssistant ProfessorVerified email at virginia.edu
Abhishek KumarPh.D.Verified email at ucsf.edu

Akash Ranjan

Staff Scientist VII (Chief Scientist) and Head Computational & Functional Genomics, Computational

Verified email at cdfd.org.in - Homepage

Computational & Functional Genomics Computational Biology and Bioinformatics


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Mapping regions containing binding residues within functional domains of Plasmodium vivax and Plasmodium knowlesi erythrocyte-binding proteins A Ranjan, CE Chitnis Proceedings of the National Academy of Sciences 96 (24), 14067-14072, 1999	148	1999
Biochemical, Biophysical, and Functional Characterization of Bacterially Expressed and Refolded Receptor Binding Domain ofPlasmodium vivax Duffy-binding Protein S Singh, K Pandey, R Chattopadhayay, SS Yazdani, A Lynn, A Bharadwaj, ... Journal of Biological Chemistry 276 (20), 17111-17116, 2001	124	2001
Computational prediction and experimental verification of novel IdeR binding sites in the upstream sequences of Mycobacterium tuberculosis open reading frames P Prakash, S Yellaboina, A Ranjan, SE Hasnain Bioinformatics 21 (10), 2161-2166, 2005	71	2005
Iron-regulated protein HupB of Mycobacterium tuberculosis positively regulates siderophore biosynthesis and is essential for growth in macrophages SD Pandey, M Choudhury, S Yousuf, PR Wheeler, SV Gordon, A Ranjan, ... Journal of bacteriology 196 (10), 1853-1865, 2014	69	2014
PredictRegulon: a web server for the prediction of the regulatory protein binding sites and operons in prokaryote genomes S Yellaboina, J Seshadri, MS Kumar, A Ranjan Nucleic acids research 32 (suppl_2), W318-W320, 2004	60	2004
GntR family of regulators in Mycobacterium smegmatis: a sequence and structure based characterization V Vindal, K Suma, A Ranjan BMC genomics 8, 1-12, 2007	56	2007
Genome scale portrait of cAMP-receptor protein (CRP) regulons in mycobacteria points to their role in pathogenesis Y Akhter, S Yellaboina, A Farhana, A Ranjan, N Ahmed, SE Hasnain Gene 407 (1-2), 148-158, 2008	51	2008
Prediction of DtxR regulon: Identification of binding sites and operons controlled by Diphtheria toxin repressor in Corynebacterium diphtheriae S Yellaboina, S Ranjan, P Chakhaiyar, SE Hasnain, A Ranjan BMC microbiology 4, 1-8, 2004	49	2004
Influence of codon usage and translation initiation codon context in theAcNPV-based expression system: Computer analysis using homologous and heterologous … A Ranjan, SE Hasnain Virus genes 9, 149-153, 1995	46	1995
The ATP ase VCP/p97 functions as a disaggregase against toxic Huntingtin‐exon1 aggregates DK Ghosh, A Roy, A Ranjan FEBS letters 592 (16), 2680-2692, 2018	35	2018
Effect of reference genome selection on the performance of computational methods for genome-wide protein-protein interaction prediction VY Muley, A Ranjan Public Library of Science 7 (7), e42057, 2012	35	2012
Comparative analysis of iron regulated genes in mycobacteria S Yellaboina, S Ranjan, V Vindal, A Ranjan FEBS letters 580 (11), 2567-2576, 2006	33	2006
Involvement of host factors in transcription from baculovirus very late promoters-a review SE Hasnain, A Jain, S Habib, S Ghosh, U Chatterji, A Ramachandran, ... Gene 190 (1), 113-118, 1997	30	1997
Genome bias influences amino acid choices: analysis of amino acid substitution and re-compilation of substitution matrices exclusive to an AT-biased genome U Paila, R Kondam, A Ranjan Nucleic Acids Research 36 (21), 6664-6675, 2008	28	2008
In silico analysis and characterization of GntR family of regulators from Mycobacterium tuberculosis V Vindal, S Ranjan, A Ranjan Tuberculosis 87 (3), 242-247, 2007	28	2007
The metastable states of proteins DK Ghosh, A Ranjan Protein Science 29 (7), 1559-1568, 2020	25	2020
Baculovirus vector-mediated expression of heterologous genes in insect cells P Sridhar, AK Awasthi, AA Azim, S Burma, S Habib, A Jain, B Mukherjee, ... J Biosci 19, 603-614, 1994	24	1994
Expression and functional characterisation of the clpC gene of Mycobacterium leprae: ClpC protein elicits human antibody response N Misra, S Habib, A Ranjan, SE Hasnain, I Nath Gene 172 (1), 99-104, 1996	23	1996
Aggregation-prone regions in HYPK help it to form sequestration complex for toxic protein aggregates DK Ghosh, A Roy, A Ranjan Journal of molecular biology 430 (7), 963-986, 2018	22	2018
MycoperonDB: a database of computationally identified operons and transcriptional units in Mycobacteria S Ranjan, RK Gundu, A Ranjan BMC bioinformatics 7, 1-6, 2006	21	2006

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