Frits Dannenberg
Frits Dannenberg
Unknown affiliation
Verified email at caltech.edu - Homepage
Title
Cited by
Cited by
Year
Guiding the folding pathway of DNA origami
KE Dunn, F Dannenberg, TE Ouldridge, M Kwiatkowska, AJ Turberfield, ...
Nature 525 (7567), 82-86, 2015
1202015
Precise parameter synthesis for stochastic biochemical systems
M Češka, F Dannenberg, N Paoletti, M Kwiatkowska, L Brim
Acta Informatica 54 (6), 589-623, 2017
92*2017
DNA walker circuits: computational potential, design, and verification
F Dannenberg, M Kwiatkowska, C Thachuk, AJ Turberfield
Natural Computing 14 (2), 195-211, 2015
712015
Modelling DNA origami self-assembly at the domain level
F Dannenberg, KE Dunn, J Bath, M Kwiatkowska, AJ Turberfield, ...
The Journal of chemical physics 143 (16), 10B617_1, 2015
252015
Computing cumulative rewards using fast adaptive uniformization
F Dannenberg, EM Hahn, M Kwiatkowska
ACM Transactions on Modeling and Computer Simulation (TOMACS) 25 (2), 1-23, 2015
182015
Automated sequence-level analysis of kinetics and thermodynamics for domain-level DNA strand-displacement systems
J Berleant, C Berlind, S Badelt, F Dannenberg, J Schaeffer, E Winfree
Journal of the Royal Society Interface 15 (149), 20180107, 2018
82018
Modelling and verification for DNA nanotechnology
FGW Dannenberg
University of Oxford, 2016
52016
Inferring parameters for an elementary step model of DNA structure kinetics with locally context-dependent Arrhenius rates
S Zolaktaf, F Dannenberg, X Rudelis, A Condon, JM Schaeffer, M Schmidt, ...
International Conference on DNA-Based Computers, 172-187, 2017
42017
Arithmetic self-similarity of infinite sequences
D Hendriks, FGW Dannenberg, J Endrullis, M Dow, JW Klop
arXiv preprint arXiv:1201.3786, 2012
32012
Symbolic dynamics and automata theory
FGW Dannenberg
32011
Efficient Parameter Estimation for DNA Kinetics Modeled as Continuous-Time Markov Chains
S Zolaktaf, F Dannenberg, E Winfree, A Bouchard-Ct, M Schmidt, ...
International Conference on DNA Computing and Molecular Programming, 80-99, 2019
12019
The pathway elaboration method for mean first passage time estimation in large continuous-time Markov chains with applications to nucleic acid kinetics
S Zolaktaf, F Dannenberg, M Schmidt, A Condon, E Winfree
arXiv preprint arXiv:2101.03657, 2021
2021
Folding pathways: DNA origami as a model system
KE Dunn, F Dannenberg, TE Ouldridge, M Kwiatkowska, J Bath, ...
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 44, S67-S67, 2015
2015
Modelling DNA origami self-assembly at the domain level
JN Bath, AJ Turberfield, TO Ouldridge, KE Dunn, F Dannenberg, ...
Journal of Chemical Physics 143 (16), 2015
2015
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